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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
121 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183551381
OOBI01005312
377363
Bacillota
GAA
Phe
>WENV183551288
OOBI01002460
99852
Bacillota
GTA
Tyr
>WENV183551434
OOBI01009328
99852
Bacillota
GTA
Tyr
>WENV183551568
OOBI01039010
212982
Bacillota
ACG
Arg
>WENV183550665
OOBI01000009
343590
Bacillota
GCC
Gly
>WENV183550666
OOBI01000009
343590
Bacillota
GCC
Gly
>WENV183551122
OOBI01000746
343590
Bacillota
GCC
Gly
>WENV183551123
OOBI01000746
343590
Bacillota
GCC
Gly
>WENV183551484
OOBI01016808
280500
Bacillota
TGC
Ala
>WENV183551041
OOBI01000492
405363
Bacillota
GCA
Cys
>WENV183551037
OOBI01000479
290391
Bacillota
TAC
Val
>WENV183551506
OOBI01021718
141454
Bacillota
TAG
Leu
>WENV183550791
OOBI01000067
229015
Bacillota
GTG
His
>WENV183551247
OOBI01001669
284746
Bacillota
CTG
Gln
>WENV183551361
OOBI01004412
280492
Bacillota
CTT
Lys
>WENV183551401
OOBI01006711
280492
Bacillota
CTT
Lys
>WENV183551509
OOBI01021718
280642
Bacillota
TTG
Gln
>WENV183550968
OOBI01000296
175842
Bacillota
CAC
Val
>WENV183551281
OOBI01002367
175842
Bacillota
CAC
Val
>WENV183551510
OOBI01021718
280639
Bacillota
TTT
Lys
>WENV183551567
OOBI01039010
46774
Bacillota
TAA
Leu
>WENV183550826
OOBI01000101
184497
Bacillota
GGG
Pro
>WENV183551513
OOBI01021718
176018
Bacillota
CAT
Met
>WENV183550760
OOBI01000043
179176
Bacillota
ACG
Arg
>WENV183551312
OOBI01002937
179176
Bacillota
ACG
Arg
>WENV183551563
OOBI01037394
282752
Bacillota
TTT
Lys
>WENV183551433
OOBI01009244
20932
Bacillota
GCT
Ser
>WENV183551475
OOBI01015454
291553
Bacillota
GAA
Phe
>WENV183551548
OOBI01027124
184687
Bacillota
CAT
Met
>WENV183550911
OOBI01000206
190476
Bacillota
CAT
Met
>WENV183551278
OOBI01002304
190476
Bacillota
CAT
Met
>WENV183551559
OOBI01035512
482593
Bacillota
CCC
Gly
>WENV183551508
OOBI01021718
176014
Bacillota
TCT
Arg
>WENV183550728
OOBI01000028
82124
Bacillota
TAA
Leu
>WENV183551507
OOBI01021718
398916
Bacillota
>WENV183550693
OOBI01000019
73664
Bacillota
CAG
Leu
>WENV183550784
OOBI01000056
73664
Bacillota
CAG
Leu
>WENV183550936
OOBI01000232
73664
Bacillota
CAG
Leu
>WENV183551398
OOBI01006617
73664
Bacillota
CAG
Leu
>WENV183551203
OOBI01001231
280447
Bacillota
GAC
Val
>WENV183551276
OOBI01002155
280447
Bacillota
GAC
Val
>WENV183551301
OOBI01002609
280447
Bacillota
GAC
Val
>WENV183550956
OOBI01000277
5692
Bacillota
GCT
Ser
>WENV183551263
OOBI01001889
5692
Bacillota
GCT
Ser
>WENV183550862
OOBI01000136
284723
Bacillota
TAC
Val
>WENV183551049
OOBI01000505
73009
Bacillota
CAG
Leu
>WENV183551135
OOBI01000788
73009
Bacillota
CAG
Leu
>WENV183551229
OOBI01001436
73009
Bacillota
CAG
Leu
>WENV183551335
OOBI01003520
481217
Bacillota
GCA
Cys
>WENV183551155
OOBI01000877
291581
Bacillota
CGG
Pro
>WENV183551234
OOBI01001453
291581
Bacillota
CGG
Pro
>WENV183551100
OOBI01000673
175859
Bacillota
TCT
Arg
>WENV183551207
OOBI01001259
175859
Bacillota
TCT
Arg
>WENV183551227
OOBI01001436
175859
Bacillota
TCT
Arg
>WENV183551498
OOBI01020456
280641
Bacillota
GTT
Asn
>WENV183550992
OOBI01000334
175831
Bacillota
ACG
Arg
>WENV183551426
OOBI01008459
175831
Bacillota
ACG
Arg
>WENV183551220
OOBI01001335
179810
Bacillota
TCT
Arg
>WENV183550827
OOBI01000104
284627
Bacillota
GAA
Phe
>WENV183551303
OOBI01002716
284627
Bacillota
GAA
Phe
>WENV183550718
OOBI01000025
293309
Bacillota
GTT
Asn
>WENV183551457
OOBI01013231
289713
Bacillota
TGT
Thr
>WENV183551468
OOBI01013721
280640
Bacillota
TAC
Val
>WENV183551118
OOBI01000730
27216
Bacillota
GCT
Ser
>WENV183551236
OOBI01001472
484885
Bacillota
TCC
Gly
>WENV183550723
OOBI01000027
480322
Bacillota
CTG
Gln
>WENV183550993
OOBI01000335
480322
Bacillota
CTG
Gln
>WENV183551054
OOBI01000519
480322
Bacillota
CTG
Gln
>WENV183551154
OOBI01000877
480322
Bacillota
CTG
Gln
>WENV183551233
OOBI01001453
480322
Bacillota
CTG
Gln
>WENV183550691
OOBI01000016
187364
Bacillota
CAT
Met
>WENV183550976
OOBI01000312
175868
Bacillota
GTT
Asn
>WENV183551094
OOBI01000655
175868
Bacillota
GTT
Asn
>WENV183551271
OOBI01002010
175868
Bacillota
GTT
Asn
>WENV183551321
OOBI01003170
175868
Bacillota
GTT
Asn
>WENV183551569
OOBI01039010
208754
Bacillota
TGG
Pro
>WENV183551320
OOBI01003170
398854
Bacillota
CTC
Glu
>WENV183550864
OOBI01000137
291576
Bacillota
CCC
Gly
>WENV183551107
OOBI01000682
291576
Bacillota
CCC
Gly
>WENV183550820
OOBI01000091
480324
Bacillota
TTG
Gln
>WENV183551274
OOBI01002115
480324
Bacillota
TTG
Gln
>WENV183551284
OOBI01002383
480324
Bacillota
TTG
Gln
>WENV183550663
OOBI01000009
497729
Bacillota
CCA
Trp
>WENV183551277
OOBI01002300
56079
Bacillota
AAG
Leu
>WENV183550706
OOBI01000025
179935
Bacillota
GTC
Asp
>WENV183550808
OOBI01000079
398857
Bacillota
TTC
Glu
>WENV183551307
OOBI01002783
117745
Bacillota
GTA
Tyr
>WENV183550920
OOBI01000213
280444
Bacillota
GGT
Thr
>WENV183550923
OOBI01000213
280444
Bacillota
GGT
Thr
>WENV183551012
OOBI01000393
280444
Bacillota
GGT
Thr
>WENV183551013
OOBI01000393
280444
Bacillota
GGT
Thr
>WENV183551067
OOBI01000562
483485
Bacillota
CCC
Gly
>WENV183551297
OOBI01002596
342104
Bacillota
TAC
Val
>WENV183550913
OOBI01000206
179755
Bacillota
CCG
Arg
>WENV183551114
OOBI01000702
179755
Bacillota
CCG
Arg
>WENV183551152
OOBI01000863
179755
Bacillota
CCG
Arg
>WENV183551318
OOBI01003072
179755
Bacillota
CCG
Arg
>WENV183551474
OOBI01015454
280547
Bacillota
GTC
Asp
>WENV183550713
OOBI01000025
401111
Bacillota
TTC
Glu
>WENV183550707
OOBI01000025
284742
Bacillota
GAA
Phe
>WENV183550912
OOBI01000206
398832
Bacillota
TTC
Glu
>WENV183551279
OOBI01002304
398832
Bacillota
TTC
Glu
>WENV183550727
OOBI01000028
118669
Bacillota
GTA
Tyr
>WENV183550943
OOBI01000261
118669
Bacillota
GTA
Tyr
>WENV183551131
OOBI01000771
118669
Bacillota
GTA
Tyr
>WENV183551372
OOBI01005041
20943
Bacillota
CGA
Ser
>WENV183550671
OOBI01000011
398852
Bacillota
CTC
Glu
>WENV183550672
OOBI01000011
398852
Bacillota
CTC
Glu
>WENV183550673
OOBI01000011
398852
Bacillota
CTC
Glu
>WENV183551405
OOBI01006798
398852
Bacillota
CTC
Glu
>WENV183550871
OOBI01000151
406186
Bacillota
CTC
Glu
>WENV183551146
OOBI01000835
285756
Bacillota
GCC
Gly
>WENV183551163
OOBI01000909
398833
Bacillota
TGT
Thr
>WENV183551180
OOBI01001039
398833
Bacillota
TGT
Thr
>WENV183550922
OOBI01000213
175849
Bacillota
GTC
Asp
>WENV183551011
OOBI01000393
175849
Bacillota
GTC
Asp
>WENV183550955
OOBI01000277
56074
Bacillota
TGA
Ser
>WENV183551262
OOBI01001889
56074
Bacillota
TGA
Ser
>WENV183551126
OOBI01000761
280473
Bacillota
TGG
Pro
>WENV183551138
OOBI01000792
280473
Bacillota
TGG
Pro
>WENV183551192
OOBI01001177
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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