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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
106 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183554297
OOBM01003169
99852
Bacillota
GTA
Tyr
>WENV183554371
OOBM01005993
99852
Bacillota
GTA
Tyr
>WENV183554499
OOBM01022288
280500
Bacillota
TGC
Ala
>WENV183554169
OOBM01001290
405363
Bacillota
GCA
Cys
>WENV183553907
OOBM01000238
281077
Bacillota
GTT
Asn
>WENV183554094
OOBM01000865
291579
Bacillota
GAA
Phe
>WENV183554585
OOBM01044546
480359
Bacillota
TCC
Gly
>WENV183553887
OOBM01000190
284746
Bacillota
CTG
Gln
>WENV183554134
OOBM01001040
175842
Bacillota
CAC
Val
>WENV183554170
OOBM01001306
291629
Bacillota
CCA
Trp
>WENV183554292
OOBM01002904
184497
Bacillota
GGG
Pro
>WENV183554586
OOBM01044546
298270
Bacillota
TAC
Val
>WENV183554584
OOBM01044546
398915
Bacillota
TTC
Glu
>WENV183553920
OOBM01000259
179176
Bacillota
ACG
Arg
>WENV183554405
OOBM01008214
179176
Bacillota
ACG
Arg
>WENV183554060
OOBM01000701
190476
Bacillota
CAT
Met
>WENV183554104
OOBM01000901
190476
Bacillota
CAT
Met
>WENV183553983
OOBM01000425
82124
Bacillota
TAA
Leu
>WENV183554123
OOBM01000968
73664
Bacillota
CAG
Leu
>WENV183553961
OOBM01000355
280447
Bacillota
GAC
Val
>WENV183554058
OOBM01000672
280447
Bacillota
GAC
Val
>WENV183554125
OOBM01000991
280447
Bacillota
GAC
Val
>WENV183554247
OOBM01001959
280447
Bacillota
GAC
Val
>WENV183554276
OOBM01002528
280447
Bacillota
GAC
Val
>WENV183553967
OOBM01000368
5692
Bacillota
GCT
Ser
>WENV183554027
OOBM01000542
5692
Bacillota
GCT
Ser
>WENV183554049
OOBM01000633
5692
Bacillota
GCT
Ser
>WENV183554054
OOBM01000649
5692
Bacillota
GCT
Ser
>WENV183554400
OOBM01008014
312274
Bacillota
GGC
Ala
>WENV183554159
OOBM01001193
186123
Bacillota
GTC
Asp
>WENV183553930
OOBM01000277
284723
Bacillota
TAC
Val
>WENV183554092
OOBM01000857
284723
Bacillota
TAC
Val
>WENV183554187
OOBM01001429
73009
Bacillota
CAG
Leu
>WENV183554216
OOBM01001685
73009
Bacillota
CAG
Leu
>WENV183554339
OOBM01004462
407726
Bacillota
CTG
Gln
>WENV183554244
OOBM01001937
291581
Bacillota
CGG
Pro
>WENV183554380
OOBM01006230
291581
Bacillota
CGG
Pro
>WENV183554088
OOBM01000821
175859
Bacillota
TCT
Arg
>WENV183554166
OOBM01001283
175859
Bacillota
TCT
Arg
>WENV183554177
OOBM01001364
175859
Bacillota
TCT
Arg
>WENV183554193
OOBM01001480
175859
Bacillota
TCT
Arg
>WENV183554323
OOBM01003916
398835
Bacillota
GCC
Gly
>WENV183554206
OOBM01001637
175847
Bacillota
GTC
Asp
>WENV183554147
OOBM01001103
175831
Bacillota
ACG
Arg
>WENV183553923
OOBM01000269
179810
Bacillota
TCT
Arg
>WENV183553962
OOBM01000361
284627
Bacillota
GAA
Phe
>WENV183554160
OOBM01001193
291634
Bacillota
GAA
Phe
>WENV183553766
OOBM01000032
294020
Bacillota
TAC
Val
>WENV183554306
OOBM01003445
195824
Bacillota
GAT
Ile
>WENV183553906
OOBM01000238
293309
Bacillota
GTT
Asn
>WENV183553997
OOBM01000456
482449
Bacillota
TCC
Gly
>WENV183554082
OOBM01000786
484885
Bacillota
TCC
Gly
>WENV183554059
OOBM01000685
480322
Bacillota
CTG
Gln
>WENV183554138
OOBM01001060
480322
Bacillota
CTG
Gln
>WENV183554243
OOBM01001937
480322
Bacillota
CTG
Gln
>WENV183554270
OOBM01002391
480322
Bacillota
CTG
Gln
>WENV183554379
OOBM01006230
480322
Bacillota
CTG
Gln
>WENV183554215
OOBM01001665
187364
Bacillota
CAT
Met
>WENV183553956
OOBM01000344
175868
Bacillota
GTT
Asn
>WENV183553989
OOBM01000449
175868
Bacillota
GTT
Asn
>WENV183554114
OOBM01000916
175868
Bacillota
GTT
Asn
>WENV183554146
OOBM01001098
175868
Bacillota
GTT
Asn
>WENV183554332
OOBM01004104
175868
Bacillota
GTT
Asn
>WENV183554359
OOBM01005449
175868
Bacillota
GTT
Asn
>WENV183553975
OOBM01000397
284744
Bacillota
TTT
Lys
>WENV183554145
OOBM01001098
398854
Bacillota
CTC
Glu
>WENV183554331
OOBM01004104
398854
Bacillota
CTC
Glu
>WENV183554358
OOBM01005449
398854
Bacillota
CTC
Glu
>WENV183553949
OOBM01000329
291576
Bacillota
CCC
Gly
>WENV183554115
OOBM01000922
291576
Bacillota
CCC
Gly
>WENV183554232
OOBM01001905
291576
Bacillota
CCC
Gly
>WENV183554168
OOBM01001290
480324
Bacillota
TTG
Gln
>WENV183554171
OOBM01001319
480324
Bacillota
TTG
Gln
>WENV183554472
OOBM01016828
480324
Bacillota
TTG
Gln
>WENV183554308
OOBM01003445
400963
Bacillota
GTT
Asn
>WENV183554530
OOBM01027296
303718
Bacillota
TGT
Thr
>WENV183554387
OOBM01006866
323864
Bacillota
TGC
Ala
>WENV183553978
OOBM01000397
179935
Bacillota
GTC
Asp
>WENV183554022
OOBM01000523
398857
Bacillota
TTC
Glu
>WENV183554252
OOBM01002006
280444
Bacillota
GGT
Thr
>WENV183554406
OOBM01008301
321753
Bacillota
GCC
Gly
>WENV183554066
OOBM01000714
179755
Bacillota
CCG
Arg
>WENV183554296
OOBM01003135
179755
Bacillota
CCG
Arg
>WENV183554302
OOBM01003346
179755
Bacillota
CCG
Arg
>WENV183553976
OOBM01000397
401111
Bacillota
TTC
Glu
>WENV183554001
OOBM01000456
401111
Bacillota
TTC
Glu
>WENV183553979
OOBM01000397
284742
Bacillota
GAA
Phe
>WENV183554061
OOBM01000701
398832
Bacillota
TTC
Glu
>WENV183554105
OOBM01000901
398832
Bacillota
TTC
Glu
>WENV183553801
OOBM01000066
118669
Bacillota
GTA
Tyr
>WENV183554101
OOBM01000888
280476
Bacillota
TTT
Lys
>WENV183554203
OOBM01001637
118359
Bacillota
GTA
Tyr
>WENV183554487
OOBM01020440
298260
Bacillota
GTT
Asn
>WENV183554293
OOBM01002974
406186
Bacillota
CTC
Glu
>WENV183553924
OOBM01000269
175857
Bacillota
GTG
His
>WENV183554198
OOBM01001595
398833
Bacillota
TGT
Thr
>WENV183554251
OOBM01002006
175849
Bacillota
GTC
Asp
>WENV183554513
OOBM01024421
317820
Bacillota
TAC
Val
>WENV183554539
OOBM01030958
280486
Bacillota
TGC
Ala
>WENV183554346
OOBM01004838
405393
Bacillota
GCC
Gly
>WENV183553966
OOBM01000368
56074
Bacillota
TGA
Ser
>WENV183554026
OOBM01000542
56074
Bacillota
TGA
Ser
>WENV183554048
OOBM01000633
56074
Bacillota
TGA
Ser
>WENV183554053
OOBM01000649
56074
Bacillota
TGA
Ser
>WENV183553948
OOBM01000324
280473
Bacillota
TGG
Pro
>WENV183554319
OOBM01003734
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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