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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
67 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183556344
OOBO01000384
99852
Bacillota
GTA
Tyr
>WENV183556440
OOBO01000862
480322
Bacillota
CTG
Gln
>WENV183556442
OOBO01000876
280428
Bacillota
GAA
Phe
>WENV183556449
OOBO01000941
280447
Bacillota
GAC
Val
>WENV183556450
OOBO01000961
480322
Bacillota
CTG
Gln
>WENV183556457
OOBO01001036
291581
Bacillota
CGG
Pro
>WENV183556456
OOBO01001036
480322
Bacillota
CTG
Gln
>WENV183556458
OOBO01001038
398833
Bacillota
TGT
Thr
>WENV183556463
OOBO01001074
295350
Bacillota
TGC
Ala
>WENV183556473
OOBO01001161
175842
Bacillota
CAC
Val
>WENV183556483
OOBO01001205
5692
Bacillota
GCT
Ser
>WENV183556482
OOBO01001205
56074
Bacillota
TGA
Ser
>WENV183556488
OOBO01001252
179810
Bacillota
TCT
Arg
>WENV183556489
OOBO01001252
175857
Bacillota
GTG
His
>WENV183556508
OOBO01001381
179755
Bacillota
CCG
Arg
>WENV183556523
OOBO01001539
190476
Bacillota
CAT
Met
>WENV183556524
OOBO01001539
398832
Bacillota
TTC
Glu
>WENV183556529
OOBO01001567
405363
Bacillota
GCA
Cys
>WENV183556536
OOBO01001620
280447
Bacillota
GAC
Val
>WENV183556539
OOBO01001642
190476
Bacillota
CAT
Met
>WENV183556540
OOBO01001642
398832
Bacillota
TTC
Glu
>WENV183556549
OOBO01001790
5692
Bacillota
GCT
Ser
>WENV183556548
OOBO01001790
56074
Bacillota
TGA
Ser
>WENV183556559
OOBO01001831
99852
Bacillota
GTA
Tyr
>WENV183556566
OOBO01001925
179755
Bacillota
CCG
Arg
>WENV183556569
OOBO01001968
175831
Bacillota
ACG
Arg
>WENV183556605
OOBO01002510
73009
Bacillota
CAG
Leu
>WENV183556615
OOBO01002623
280444
Bacillota
GGT
Thr
>WENV183556618
OOBO01002623
280444
Bacillota
GGT
Thr
>WENV183556617
OOBO01002623
175849
Bacillota
GTC
Asp
>WENV183556631
OOBO01002921
175859
Bacillota
TCT
Arg
>WENV183556652
OOBO01003541
287380
Bacillota
CTT
Lys
>WENV183556663
OOBO01004026
321248
Bacillota
TAC
Val
>WENV183556669
OOBO01004097
291581
Bacillota
CGG
Pro
>WENV183556668
OOBO01004097
480322
Bacillota
CTG
Gln
>WENV183556676
OOBO01004488
117745
Bacillota
GTA
Tyr
>WENV183556678
OOBO01004577
5692
Bacillota
GCT
Ser
>WENV183556677
OOBO01004577
56074
Bacillota
TGA
Ser
>WENV183556687
OOBO01005070
280473
Bacillota
TGG
Pro
>WENV183556690
OOBO01005124
215243
Bacillota
CAT
Met
>WENV183556697
OOBO01005468
280447
Bacillota
GAC
Val
>WENV183556703
OOBO01005719
480324
Bacillota
TTG
Gln
>WENV183556706
OOBO01005728
100945
Bacillota
CAG
Leu
>WENV183556737
OOBO01006585
303718
Bacillota
TGT
Thr
>WENV183556740
OOBO01006698
405393
Bacillota
GCC
Gly
>WENV183556745
OOBO01007129
483485
Bacillota
CCC
Gly
>WENV183556747
OOBO01007144
280447
Bacillota
GAC
Val
>WENV183556750
OOBO01007572
56079
Bacillota
AAG
Leu
>WENV183556761
OOBO01008278
497729
Bacillota
CCA
Trp
>WENV183556762
OOBO01008395
187458
Bacillota
CAT
Met
>WENV183556787
OOBO01010483
284627
Bacillota
GAA
Phe
>WENV183556791
OOBO01010570
280483
Bacillota
GAA
Phe
>WENV183556792
OOBO01010570
285756
Bacillota
GCC
Gly
>WENV183556807
OOBO01011181
175825
Bacillota
GAT
Ile
>WENV183556806
OOBO01011181
280436
Bacillota
TGC
Ala
>WENV183556840
OOBO01014327
280486
Bacillota
TGC
Ala
>WENV183556854
OOBO01015360
280447
Bacillota
GAC
Val
>WENV183556857
OOBO01016127
280492
Bacillota
CTT
Lys
>WENV183556867
OOBO01017949
175868
Bacillota
GTT
Asn
>WENV183556872
OOBO01018319
398857
Bacillota
TTC
Glu
>WENV183556905
OOBO01022235
280500
Bacillota
TGC
Ala
>WENV183556906
OOBO01022855
291579
Bacillota
GAA
Phe
>WENV183556912
OOBO01024429
291576
Bacillota
CCC
Gly
>WENV183556924
OOBO01026414
292374
Bacillota
TGC
Ala
>WENV183556923
OOBO01026414
201856
Bacillota
GAT
Ile
>WENV183556940
OOBO01031611
404126
Bacillota
GCC
Gly
>WENV183556952
OOBO01040400
179176
Bacillota
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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