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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
153 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183557368
OOBP01000412
179176
Bacillota
ACG
Arg
>WENV183557486
OOBP01000962
175831
Bacillota
ACG
Arg
>WENV183557488
OOBP01000967
175831
Bacillota
ACG
Arg
>WENV183557574
OOBP01001441
175831
Bacillota
ACG
Arg
>WENV183557785
OOBP01006628
175831
Bacillota
ACG
Arg
>WENV183557556
OOBP01001295
175842
Bacillota
CAC
Val
>WENV183557563
OOBP01001317
175842
Bacillota
CAC
Val
>WENV183557624
OOBP01002158
175842
Bacillota
CAC
Val
>WENV183557755
OOBP01005519
175842
Bacillota
CAC
Val
>WENV183557289
OOBP01000259
73009
Bacillota
CAG
Leu
>WENV183557412
OOBP01000560
73009
Bacillota
CAG
Leu
>WENV183557554
OOBP01001287
73009
Bacillota
CAG
Leu
>WENV183557680
OOBP01003152
73009
Bacillota
CAG
Leu
>WENV183557730
OOBP01004121
73009
Bacillota
CAG
Leu
>WENV183557929
OOBP01026561
73009
Bacillota
CAG
Leu
>WENV183557280
OOBP01000245
179917
Bacillota
CAT
Met
>WENV183557286
OOBP01000252
215243
Bacillota
CAT
Met
>WENV183557359
OOBP01000372
190476
Bacillota
CAT
Met
>WENV183557366
OOBP01000407
190476
Bacillota
CAT
Met
>WENV183557852
OOBP01014515
184495
Bacillota
CAT
Met
>WENV183556992
OOBP01000003
497729
Bacillota
CCA
Trp
>WENV183557068
OOBP01000035
291576
Bacillota
CCC
Gly
>WENV183557426
OOBP01000666
291576
Bacillota
CCC
Gly
>WENV183557365
OOBP01000407
179755
Bacillota
CCG
Arg
>WENV183557626
OOBP01002200
179755
Bacillota
CCG
Arg
>WENV183557464
OOBP01000828
20943
Bacillota
CGA
Ser
>WENV183557178
OOBP01000127
291581
Bacillota
CGG
Pro
>WENV183557590
OOBP01001561
291581
Bacillota
CGG
Pro
>WENV183557663
OOBP01002742
291581
Bacillota
CGG
Pro
>WENV183557190
OOBP01000142
398854
Bacillota
CTC
Glu
>WENV183557306
OOBP01000290
398854
Bacillota
CTC
Glu
>WENV183557692
OOBP01003454
398854
Bacillota
CTC
Glu
>WENV183557728
OOBP01003968
398854
Bacillota
CTC
Glu
>WENV183557949
OOBP01035383
398854
Bacillota
CTC
Glu
>WENV183557069
OOBP01000035
480322
Bacillota
CTG
Gln
>WENV183557177
OOBP01000127
480322
Bacillota
CTG
Gln
>WENV183557433
OOBP01000698
480322
Bacillota
CTG
Gln
>WENV183557475
OOBP01000901
480322
Bacillota
CTG
Gln
>WENV183557589
OOBP01001561
480322
Bacillota
CTG
Gln
>WENV183557662
OOBP01002742
480322
Bacillota
CTG
Gln
>WENV183557926
OOBP01025518
480322
Bacillota
CTG
Gln
>WENV183557693
OOBP01003454
322848
Bacillota
CTT
Lys
>WENV183557833
OOBP01013340
322848
Bacillota
CTT
Lys
>WENV183557898
OOBP01021575
322848
Bacillota
CTT
Lys
>WENV183557950
OOBP01035383
322848
Bacillota
CTT
Lys
>WENV183557314
OOBP01000297
280428
Bacillota
GAA
Phe
>WENV183557513
OOBP01001067
280428
Bacillota
GAA
Phe
>WENV183557538
OOBP01001221
280428
Bacillota
GAA
Phe
>WENV183557697
OOBP01003522
280428
Bacillota
GAA
Phe
>WENV183557686
OOBP01003308
280483
Bacillota
GAA
Phe
>WENV183557257
OOBP01000210
280447
Bacillota
GAC
Val
>WENV183557346
OOBP01000338
280447
Bacillota
GAC
Val
>WENV183557425
OOBP01000654
280447
Bacillota
GAC
Val
>WENV183557429
OOBP01000675
280447
Bacillota
GAC
Val
>WENV183557619
OOBP01002004
280447
Bacillota
GAC
Val
>WENV183557703
OOBP01003835
280447
Bacillota
GAC
Val
>WENV183557759
OOBP01005709
179563
Bacillota
GAT
Ile
>WENV183557910
OOBP01023892
175916
Bacillota
GAT
Ile
>WENV183557501
OOBP01001013
201856
Bacillota
GAT
Ile
>WENV183557858
OOBP01016040
201856
Bacillota
GAT
Ile
>WENV183557533
OOBP01001205
405363
Bacillota
GCA
Cys
>WENV183557542
OOBP01001221
405363
Bacillota
GCA
Cys
>WENV183557803
OOBP01007853
408526
Bacillota
GCA
Cys
>WENV183557824
OOBP01010635
481217
Bacillota
GCA
Cys
>WENV183557839
OOBP01013750
481217
Bacillota
GCA
Cys
>WENV183557469
OOBP01000867
287289
Bacillota
GCC
Gly
>WENV183557383
OOBP01000461
290325
Bacillota
GCC
Gly
>WENV183557722
OOBP01003917
20932
Bacillota
GCT
Ser
>WENV183557186
OOBP01000138
5692
Bacillota
GCT
Ser
>WENV183557665
OOBP01002795
5692
Bacillota
GCT
Ser
>WENV183557757
OOBP01005673
5692
Bacillota
GCT
Ser
>WENV183557825
OOBP01011146
20942
Bacillota
GGA
Ser
>WENV183557413
OOBP01000562
184497
Bacillota
GGG
Pro
>WENV183557851
OOBP01014515
296855
Bacillota
GGT
Thr
>WENV183557390
OOBP01000490
280444
Bacillota
GGT
Thr
>WENV183557401
OOBP01000511
280444
Bacillota
GGT
Thr
>WENV183557402
OOBP01000511
280444
Bacillota
GGT
Thr
>WENV183557547
OOBP01001259
280444
Bacillota
GGT
Thr
>WENV183557654
OOBP01002644
280444
Bacillota
GGT
Thr
>WENV183557543
OOBP01001221
99852
Bacillota
GTA
Tyr
>WENV183557959
OOBP01038496
118359
Bacillota
GTA
Tyr
>WENV183557889
OOBP01020015
175847
Bacillota
GTC
Asp
>WENV183557495
OOBP01000972
180688
Bacillota
GTC
Asp
>WENV183557333
OOBP01000323
175911
Bacillota
GTC
Asp
>WENV183557440
OOBP01000707
175911
Bacillota
GTC
Asp
>WENV183557467
OOBP01000867
175911
Bacillota
GTC
Asp
>WENV183557912
OOBP01023999
280547
Bacillota
GTC
Asp
>WENV183557677
OOBP01003127
175915
Bacillota
GTC
Asp
>WENV183557957
OOBP01038496
175915
Bacillota
GTC
Asp
>WENV183557653
OOBP01002644
175849
Bacillota
GTC
Asp
>WENV183557699
OOBP01003522
175849
Bacillota
GTC
Asp
>WENV183557313
OOBP01000297
175849
Bacillota
GTC
Asp
>WENV183557400
OOBP01000511
175849
Bacillota
GTC
Asp
>WENV183557512
OOBP01001067
175849
Bacillota
GTC
Asp
>WENV183557540
OOBP01001221
175849
Bacillota
GTC
Asp
>WENV183557526
OOBP01001128
229015
Bacillota
GTG
His
>WENV183557953
OOBP01036707
289716
Bacillota
GTG
His
>WENV183557775
OOBP01006310
175857
Bacillota
GTG
His
>WENV183557191
OOBP01000142
175868
Bacillota
GTT
Asn
>WENV183557302
OOBP01000285
175868
Bacillota
GTT
Asn
>WENV183557307
OOBP01000290
175868
Bacillota
GTT
Asn
>WENV183557601
OOBP01001710
175868
Bacillota
GTT
Asn
>WENV183557729
OOBP01003968
175868
Bacillota
GTT
Asn
>WENV183557566
OOBP01001401
298260
Bacillota
GTT
Asn
>WENV183557744
OOBP01005038
46835
Bacillota
TAA
Leu
>WENV183557873
OOBP01017358
46835
Bacillota
TAA
Leu
>WENV183557248
OOBP01000204
290391
Bacillota
TAC
Val
>WENV183557496
OOBP01000972
290391
Bacillota
TAC
Val
>WENV183557145
OOBP01000102
284723
Bacillota
TAC
Val
>WENV183557277
OOBP01000245
284723
Bacillota
TAC
Val
>WENV183557636
OOBP01002264
289715
Bacillota
TAC
Val
>WENV183557640
OOBP01002264
289715
Bacillota
TAC
Val
>WENV183556982
OOBP01000002
321248
Bacillota
TAC
Val
>WENV183557798
OOBP01007574
119459
Bacillota
TAG
Leu
>WENV183557867
OOBP01016736
484885
Bacillota
TCC
Gly
>WENV183557967
OOBP01040895
228119
Bacillota
TCT
Arg
>WENV183557395
OOBP01000505
175859
Bacillota
TCT
Arg
>WENV183557525
OOBP01001128
179810
Bacillota
TCT
Arg
>WENV183557666
OOBP01002903
48505
Bacillota
TGA
Ser
>WENV183557185
OOBP01000138
56074
Bacillota
TGA
Ser
>WENV183557664
OOBP01002795
56074
Bacillota
TGA
Ser
>WENV183557756
OOBP01005673
56074
Bacillota
TGA
Ser
>WENV183557894
OOBP01020352
280500
Bacillota
TGC
Ala
>WENV183557911
OOBP01023892
280500
Bacillota
TGC
Ala
>WENV183557758
OOBP01005709
295166
Bacillota
TGC
Ala
>WENV183557771
OOBP01006236
323864
Bacillota
TGC
Ala
>WENV183557859
OOBP01016040
292374
Bacillota
TGC
Ala
>WENV183557840
OOBP01013897
291597
Bacillota
TGC
Ala
>WENV183557914
OOBP01024177
291597
Bacillota
TGC
Ala
>WENV183557971
OOBP01043014
280486
Bacillota
TGC
Ala
>WENV183557976
OOBP01043655
280486
Bacillota
TGC
Ala
>WENV183557258
OOBP01000210
280473
Bacillota
TGG
Pro
>WENV183557263
OOBP01000220
280473
Bacillota
TGG
Pro
>WENV183557651
OOBP01002614
280473
Bacillota
TGG
Pro
>WENV183557733
OOBP01004280
280473
Bacillota
TGG
Pro
>WENV183557848
OOBP01014515
289713
Bacillota
TGT
Thr
>WENV183557064
OOBP01000032
398833
Bacillota
TGT
Thr
>WENV183557317
OOBP01000305
398833
Bacillota
TGT
Thr
>WENV183557351
OOBP01000346
398833
Bacillota
TGT
Thr
>WENV183557493
OOBP01000972
285556
Bacillota
TGT
Thr
>WENV183557490
OOBP01000971
399153
Bacillota
TTC
Glu
>WENV183557635
OOBP01002264
432453
Bacillota
TTC
Glu
>WENV183557639
OOBP01002264
432453
Bacillota
TTC
Glu
>WENV183557947
OOBP01034158
398857
Bacillota
TTC
Glu
>WENV183557360
OOBP01000372
398832
Bacillota
TTC
Glu
>WENV183557367
OOBP01000407
398832
Bacillota
TTC
Glu
>WENV183557954
OOBP01036707
404091
Bacillota
TTG
Gln
>WENV183557776
OOBP01006310
401685
Bacillota
TTG
Gln
>WENV183557176
OOBP01000127
480324
Bacillota
TTG
Gln
>WENV183557385
OOBP01000465
480324
Bacillota
TTG
Gln
>WENV183557575
OOBP01001456
480324
Bacillota
TTG
Gln
>WENV183557634
OOBP01002264
289761
Bacillota
TTT
Lys
>WENV183557684
OOBP01003286
280476
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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