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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
92 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183558126
OOBR01000011
480322
Bacillota
CTG
Gln
>WENV183558149
OOBR01000022
175842
Bacillota
CAC
Val
>WENV183558150
OOBR01000022
175859
Bacillota
TCT
Arg
>WENV183558148
OOBR01000022
280444
Bacillota
GGT
Thr
>WENV183558155
OOBR01000027
187364
Bacillota
CAT
Met
>WENV183558157
OOBR01000029
73664
Bacillota
CAG
Leu
>WENV183558166
OOBR01000032
179176
Bacillota
ACG
Arg
>WENV183558172
OOBR01000035
406186
Bacillota
CTC
Glu
>WENV183558229
OOBR01000087
280444
Bacillota
GGT
Thr
>WENV183558228
OOBR01000087
175849
Bacillota
GTC
Asp
>WENV183558226
OOBR01000087
280473
Bacillota
TGG
Pro
>WENV183558236
OOBR01000092
280447
Bacillota
GAC
Val
>WENV183558264
OOBR01000122
118669
Bacillota
GTA
Tyr
>WENV183558266
OOBR01000129
483485
Bacillota
CCC
Gly
>WENV183558283
OOBR01000152
229015
Bacillota
GTG
His
>WENV183558284
OOBR01000152
401685
Bacillota
TTG
Gln
>WENV183558293
OOBR01000163
291581
Bacillota
CGG
Pro
>WENV183558292
OOBR01000163
480322
Bacillota
CTG
Gln
>WENV183558291
OOBR01000163
480324
Bacillota
TTG
Gln
>WENV183558298
OOBR01000166
284723
Bacillota
TAC
Val
>WENV183558305
OOBR01000178
398833
Bacillota
TGT
Thr
>WENV183558318
OOBR01000187
349107
Bacillota
GCC
Gly
>WENV183558320
OOBR01000187
349107
Bacillota
GCC
Gly
>WENV183558321
OOBR01000187
405363
Bacillota
GCA
Cys
>WENV183558317
OOBR01000187
280428
Bacillota
GAA
Phe
>WENV183558315
OOBR01000187
291581
Bacillota
CGG
Pro
>WENV183558314
OOBR01000187
480322
Bacillota
CTG
Gln
>WENV183558316
OOBR01000187
480324
Bacillota
TTG
Gln
>WENV183558319
OOBR01000187
175849
Bacillota
GTC
Asp
>WENV183558338
OOBR01000201
290391
Bacillota
TAC
Val
>WENV183558341
OOBR01000202
118669
Bacillota
GTA
Tyr
>WENV183558349
OOBR01000206
179755
Bacillota
CCG
Arg
>WENV183558348
OOBR01000206
398832
Bacillota
TTC
Glu
>WENV183558364
OOBR01000223
398833
Bacillota
TGT
Thr
>WENV183558382
OOBR01000240
5692
Bacillota
GCT
Ser
>WENV183558381
OOBR01000240
56074
Bacillota
TGA
Ser
>WENV183558385
OOBR01000245
480322
Bacillota
CTG
Gln
>WENV183558388
OOBR01000248
5692
Bacillota
GCT
Ser
>WENV183558387
OOBR01000248
56074
Bacillota
TGA
Ser
>WENV183558401
OOBR01000297
175831
Bacillota
ACG
Arg
>WENV183558405
OOBR01000312
175868
Bacillota
GTT
Asn
>WENV183558404
OOBR01000312
398854
Bacillota
CTC
Glu
>WENV183558412
OOBR01000329
73664
Bacillota
CAG
Leu
>WENV183558418
OOBR01000336
175868
Bacillota
GTT
Asn
>WENV183558436
OOBR01000367
73009
Bacillota
CAG
Leu
>WENV183558437
OOBR01000370
27216
Bacillota
GCT
Ser
>WENV183558439
OOBR01000374
179176
Bacillota
ACG
Arg
>WENV183558445
OOBR01000390
280476
Bacillota
TTT
Lys
>WENV183558448
OOBR01000399
291576
Bacillota
CCC
Gly
>WENV183558451
OOBR01000415
175868
Bacillota
GTT
Asn
>WENV183558481
OOBR01000486
175859
Bacillota
TCT
Arg
>WENV183558483
OOBR01000494
73009
Bacillota
CAG
Leu
>WENV183558485
OOBR01000508
175831
Bacillota
ACG
Arg
>WENV183558486
OOBR01000511
343590
Bacillota
GCC
Gly
>WENV183558487
OOBR01000511
343590
Bacillota
GCC
Gly
>WENV183558499
OOBR01000534
99852
Bacillota
GTA
Tyr
>WENV183558501
OOBR01000552
73009
Bacillota
CAG
Leu
>WENV183558540
OOBR01000826
82124
Bacillota
TAA
Leu
>WENV183558544
OOBR01000860
290391
Bacillota
TAC
Val
>WENV183558547
OOBR01000860
285756
Bacillota
GCC
Gly
>WENV183558553
OOBR01000910
73009
Bacillota
CAG
Leu
>WENV183558556
OOBR01000914
280447
Bacillota
GAC
Val
>WENV183558561
OOBR01000945
179755
Bacillota
CCG
Arg
>WENV183558562
OOBR01000974
175842
Bacillota
CAC
Val
>WENV183558567
OOBR01001016
291576
Bacillota
CCC
Gly
>WENV183558571
OOBR01001066
280473
Bacillota
TGG
Pro
>WENV183558587
OOBR01001283
280444
Bacillota
GGT
Thr
>WENV183558590
OOBR01001308
398832
Bacillota
TTC
Glu
>WENV183558611
OOBR01001538
398857
Bacillota
TTC
Glu
>WENV183558620
OOBR01001541
346451
Bacillota
TTT
Lys
>WENV183558654
OOBR01002015
349107
Bacillota
GCC
Gly
>WENV183558658
OOBR01002015
349107
Bacillota
GCC
Gly
>WENV183558657
OOBR01002015
280428
Bacillota
GAA
Phe
>WENV183558655
OOBR01002015
280466
Bacillota
TAC
Val
>WENV183558690
OOBR01002692
99852
Bacillota
GTA
Tyr
>WENV183558698
OOBR01003082
510477
Bacillota
TCC
Gly
>WENV183558729
OOBR01004103
291629
Bacillota
CCA
Trp
>WENV183558727
OOBR01004103
186123
Bacillota
GTC
Asp
>WENV183558728
OOBR01004103
405393
Bacillota
GCC
Gly
>WENV183558733
OOBR01004260
497729
Bacillota
CCA
Trp
>WENV183558736
OOBR01004316
280447
Bacillota
GAC
Val
>WENV183558784
OOBR01006997
184497
Bacillota
GGG
Pro
>WENV183558808
OOBR01008507
332181
Bacillota
TGT
Thr
>WENV183558811
OOBR01008507
289123
Bacillota
GGT
Thr
>WENV183558865
OOBR01013492
398852
Bacillota
CTC
Glu
>WENV183558890
OOBR01017519
215243
Bacillota
CAT
Met
>WENV183558896
OOBR01017945
291634
Bacillota
GAA
Phe
>WENV183558900
OOBR01018459
280500
Bacillota
TGC
Ala
>WENV183558912
OOBR01021360
298260
Bacillota
GTT
Asn
>WENV183558947
OOBR01027809
280646
Bacillota
TGC
Ala
>WENV183558981
OOBR01038213
481217
Bacillota
GCA
Cys
>WENV183558988
OOBR01040832
73638
Bacillota
AAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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