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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183559293
OOBS01001512
99852
Bacillota
GTA
Tyr
>WENV183559512
OOBS01025342
280500
Bacillota
TGC
Ala
>WENV183559292
OOBS01001512
405363
Bacillota
GCA
Cys
>WENV183559136
OOBS01000160
281077
Bacillota
GTT
Asn
>WENV183559277
OOBS01001352
280428
Bacillota
GAA
Phe
>WENV183559288
OOBS01001512
280428
Bacillota
GAA
Phe
>WENV183559357
OOBS01004459
280428
Bacillota
GAA
Phe
>WENV183559372
OOBS01004937
280428
Bacillota
GAA
Phe
>WENV183559275
OOBS01001352
280466
Bacillota
TAC
Val
>WENV183559189
OOBS01000440
284746
Bacillota
CTG
Gln
>WENV183559450
OOBS01010975
175842
Bacillota
CAC
Val
>WENV183559484
OOBS01018813
179563
Bacillota
GAT
Ile
>WENV183559343
OOBS01003120
295166
Bacillota
TGC
Ala
>WENV183559483
OOBS01018813
295166
Bacillota
TGC
Ala
>WENV183559429
OOBS01009263
280447
Bacillota
GAC
Val
>WENV183559447
OOBS01010693
280447
Bacillota
GAC
Val
>WENV183559474
OOBS01015653
5692
Bacillota
GCT
Ser
>WENV183559280
OOBS01001372
73009
Bacillota
CAG
Leu
>WENV183559411
OOBS01007245
73009
Bacillota
CAG
Leu
>WENV183559482
OOBS01018366
291581
Bacillota
CGG
Pro
>WENV183559248
OOBS01001122
175859
Bacillota
TCT
Arg
>WENV183559497
OOBS01023031
175847
Bacillota
GTC
Asp
>WENV183559449
OOBS01010881
175831
Bacillota
ACG
Arg
>WENV183559436
OOBS01009752
179810
Bacillota
TCT
Arg
>WENV183559296
OOBS01001576
284627
Bacillota
GAA
Phe
>WENV183559431
OOBS01009446
284627
Bacillota
GAA
Phe
>WENV183559213
OOBS01000766
294020
Bacillota
TAC
Val
>WENV183559269
OOBS01001329
482449
Bacillota
TCC
Gly
>WENV183559469
OOBS01014158
175916
Bacillota
GAT
Ile
>WENV183559227
OOBS01000885
284744
Bacillota
TTT
Lys
>WENV183559382
OOBS01005109
119278
Bacillota
TAG
Leu
>WENV183559398
OOBS01005485
322848
Bacillota
CTT
Lys
>WENV183559464
OOBS01012878
291576
Bacillota
CCC
Gly
>WENV183559260
OOBS01001239
480324
Bacillota
TTG
Gln
>WENV183559230
OOBS01000885
179935
Bacillota
GTC
Asp
>WENV183559266
OOBS01001329
179935
Bacillota
GTC
Asp
>WENV183559473
OOBS01015084
280444
Bacillota
GGT
Thr
>WENV183559274
OOBS01001352
321753
Bacillota
GCC
Gly
>WENV183559278
OOBS01001352
321753
Bacillota
GCC
Gly
>WENV183559289
OOBS01001512
321753
Bacillota
GCC
Gly
>WENV183559291
OOBS01001512
321753
Bacillota
GCC
Gly
>WENV183559358
OOBS01004459
321753
Bacillota
GCC
Gly
>WENV183559373
OOBS01004937
321753
Bacillota
GCC
Gly
>WENV183559475
OOBS01016040
321753
Bacillota
GCC
Gly
>WENV183559228
OOBS01000885
401111
Bacillota
TTC
Glu
>WENV183559273
OOBS01001329
401111
Bacillota
TTC
Glu
>WENV183559231
OOBS01000885
284742
Bacillota
GAA
Phe
>WENV183559267
OOBS01001329
284742
Bacillota
GAA
Phe
>WENV183559400
OOBS01005778
398832
Bacillota
TTC
Glu
>WENV183559196
OOBS01000526
118669
Bacillota
GTA
Tyr
>WENV183559466
OOBS01013692
118669
Bacillota
GTA
Tyr
>WENV183559362
OOBS01004503
289123
Bacillota
GGT
Thr
>WENV183559437
OOBS01009752
175857
Bacillota
GTG
His
>WENV183559285
OOBS01001439
398833
Bacillota
TGT
Thr
>WENV183559276
OOBS01001352
175849
Bacillota
GTC
Asp
>WENV183559290
OOBS01001512
175849
Bacillota
GTC
Asp
>WENV183559455
OOBS01012412
280486
Bacillota
TGC
Ala
>WENV183559418
OOBS01008108
56074
Bacillota
TGA
Ser
>WENV183559463
OOBS01012649
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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