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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183560326
OOBT01021143
200563
Bacillota
TGG
Pro
>WENV183559863
OOBT01001569
343590
Bacillota
GCC
Gly
>WENV183560287
OOBT01017163
280500
Bacillota
TGC
Ala
>WENV183560188
OOBT01008728
405363
Bacillota
GCA
Cys
>WENV183560092
OOBT01005209
290391
Bacillota
TAC
Val
>WENV183559627
OOBT01000240
229015
Bacillota
GTG
His
>WENV183560162
OOBT01007556
284746
Bacillota
CTG
Gln
>WENV183560139
OOBT01006671
280492
Bacillota
CTT
Lys
>WENV183559856
OOBT01001526
175842
Bacillota
CAC
Val
>WENV183560324
OOBT01021143
176018
Bacillota
CAT
Met
>WENV183560368
OOBT01029011
179563
Bacillota
GAT
Ile
>WENV183560308
OOBT01019957
190476
Bacillota
CAT
Met
>WENV183559906
OOBT01001935
280447
Bacillota
GAC
Val
>WENV183559674
OOBT01000362
73009
Bacillota
CAG
Leu
>WENV183560231
OOBT01011409
280646
Bacillota
TGC
Ala
>WENV183559796
OOBT01001046
291581
Bacillota
CGG
Pro
>WENV183559866
OOBT01001595
175859
Bacillota
TCT
Arg
>WENV183560011
OOBT01003317
175859
Bacillota
TCT
Arg
>WENV183559880
OOBT01001670
175847
Bacillota
GTC
Asp
>WENV183559864
OOBT01001580
175831
Bacillota
ACG
Arg
>WENV183559626
OOBT01000240
179810
Bacillota
TCT
Arg
>WENV183559704
OOBT01000443
284627
Bacillota
GAA
Phe
>WENV183559778
OOBT01000968
294020
Bacillota
TAC
Val
>WENV183560313
OOBT01020463
195824
Bacillota
GAT
Ile
>WENV183560176
OOBT01008149
293309
Bacillota
GTT
Asn
>WENV183559795
OOBT01001046
480322
Bacillota
CTG
Gln
>WENV183559717
OOBT01000531
175868
Bacillota
GTT
Asn
>WENV183560228
OOBT01011408
284744
Bacillota
TTT
Lys
>WENV183559715
OOBT01000531
322848
Bacillota
CTT
Lys
>WENV183559716
OOBT01000531
398854
Bacillota
CTC
Glu
>WENV183560225
OOBT01011092
291576
Bacillota
CCC
Gly
>WENV183560055
OOBT01004435
480324
Bacillota
TTG
Gln
>WENV183559956
OOBT01002592
303718
Bacillota
TGT
Thr
>WENV183560172
OOBT01007934
303718
Bacillota
TGT
Thr
>WENV183559917
OOBT01002041
56079
Bacillota
AAG
Leu
>WENV183559985
OOBT01002931
280444
Bacillota
GGT
Thr
>WENV183560071
OOBT01004808
317482
Bacillota
TAC
Val
>WENV183559808
OOBT01001121
179755
Bacillota
CCG
Arg
>WENV183560214
OOBT01010377
179755
Bacillota
CCG
Arg
>WENV183560229
OOBT01011408
401111
Bacillota
TTC
Glu
>WENV183560397
OOBT01036674
344985
Bacillota
GAA
Phe
>WENV183560309
OOBT01019957
398832
Bacillota
TTC
Glu
>WENV183560351
OOBT01025726
203851
Bacillota
TCT
Arg
>WENV183559640
OOBT01000262
118669
Bacillota
GTA
Tyr
>WENV183560151
OOBT01007274
118669
Bacillota
GTA
Tyr
>WENV183560119
OOBT01005834
398852
Bacillota
CTC
Glu
>WENV183560282
OOBT01016740
312380
Bacillota
TAC
Val
>WENV183560095
OOBT01005209
285756
Bacillota
GCC
Gly
>WENV183559783
OOBT01000995
398833
Bacillota
TGT
Thr
>WENV183560312
OOBT01020306
175849
Bacillota
GTC
Asp
>WENV183560292
OOBT01018440
56074
Bacillota
TGA
Ser
>WENV183560107
OOBT01005486
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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