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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
143 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183562843
OOBW01001964
118683
Bacillota
GTA
Tyr
>WENV183562878
OOBW01003012
118683
Bacillota
GTA
Tyr
>WENV183562363
OOBW01000063
99852
Bacillota
GTA
Tyr
>WENV183562563
OOBW01000244
99852
Bacillota
GTA
Tyr
>WENV183562644
OOBW01000410
99852
Bacillota
GTA
Tyr
>WENV183562664
OOBW01000455
99852
Bacillota
GTA
Tyr
>WENV183562835
OOBW01001750
99852
Bacillota
GTA
Tyr
>WENV183562920
OOBW01004466
303627
Bacillota
GAA
Phe
>WENV183562690
OOBW01000555
349107
Bacillota
GCC
Gly
>WENV183562710
OOBW01000598
349107
Bacillota
GCC
Gly
>WENV183562833
OOBW01001750
349107
Bacillota
GCC
Gly
>WENV183562691
OOBW01000555
405363
Bacillota
GCA
Cys
>WENV183562711
OOBW01000598
405363
Bacillota
GCA
Cys
>WENV183562834
OOBW01001750
405363
Bacillota
GCA
Cys
>WENV183562431
OOBW01000103
281077
Bacillota
GTT
Asn
>WENV183562689
OOBW01000555
280428
Bacillota
GAA
Phe
>WENV183563038
OOBW01017863
280428
Bacillota
GAA
Phe
>WENV183562751
OOBW01000914
356660
Bacillota
CTT
Lys
>WENV183562752
OOBW01000914
356660
Bacillota
CTT
Lys
>WENV183563052
OOBW01021657
480359
Bacillota
TCC
Gly
>WENV183562795
OOBW01001302
302145
Bacillota
GAA
Phe
>WENV183562976
OOBW01007130
302145
Bacillota
GAA
Phe
>WENV183562616
OOBW01000365
284746
Bacillota
CTG
Gln
>WENV183562507
OOBW01000174
175842
Bacillota
CAC
Val
>WENV183563017
OOBW01013767
175842
Bacillota
CAC
Val
>WENV183563050
OOBW01021657
280639
Bacillota
TTT
Lys
>WENV183562923
OOBW01004498
348419
Bacillota
GTT
Asn
>WENV183562617
OOBW01000368
184497
Bacillota
GGG
Pro
>WENV183562840
OOBW01001964
400140
Bacillota
TTC
Glu
>WENV183562744
OOBW01000820
179176
Bacillota
ACG
Arg
>WENV183562493
OOBW01000154
295166
Bacillota
TGC
Ala
>WENV183562910
OOBW01003977
215243
Bacillota
CAT
Met
>WENV183562394
OOBW01000084
190476
Bacillota
CAT
Met
>WENV183562559
OOBW01000240
190476
Bacillota
CAT
Met
>WENV183562525
OOBW01000189
280447
Bacillota
GAC
Val
>WENV183562589
OOBW01000303
280447
Bacillota
GAC
Val
>WENV183562590
OOBW01000304
280447
Bacillota
GAC
Val
>WENV183562736
OOBW01000778
280447
Bacillota
GAC
Val
>WENV183562907
OOBW01003779
280447
Bacillota
GAC
Val
>WENV183563049
OOBW01021445
280447
Bacillota
GAC
Val
>WENV183562358
OOBW01000060
5692
Bacillota
GCT
Ser
>WENV183562365
OOBW01000065
5692
Bacillota
GCT
Ser
>WENV183562452
OOBW01000110
5692
Bacillota
GCT
Ser
>WENV183562603
OOBW01000333
186123
Bacillota
GTC
Asp
>WENV183562812
OOBW01001453
284723
Bacillota
TAC
Val
>WENV183562320
OOBW01000041
73009
Bacillota
CAG
Leu
>WENV183562640
OOBW01000398
73009
Bacillota
CAG
Leu
>WENV183562663
OOBW01000455
73009
Bacillota
CAG
Leu
>WENV183562767
OOBW01001066
73009
Bacillota
CAG
Leu
>WENV183562966
OOBW01006162
73009
Bacillota
CAG
Leu
>WENV183562428
OOBW01000101
291581
Bacillota
CGG
Pro
>WENV183562587
OOBW01000301
291581
Bacillota
CGG
Pro
>WENV183562707
OOBW01000598
291581
Bacillota
CGG
Pro
>WENV183562449
OOBW01000107
175859
Bacillota
TCT
Arg
>WENV183562551
OOBW01000232
175859
Bacillota
TCT
Arg
>WENV183562765
OOBW01001066
175859
Bacillota
TCT
Arg
>WENV183562382
OOBW01000073
175831
Bacillota
ACG
Arg
>WENV183562396
OOBW01000084
175831
Bacillota
ACG
Arg
>WENV183562526
OOBW01000191
175831
Bacillota
ACG
Arg
>WENV183562921
OOBW01004466
487004
Bacillota
TCC
Gly
>WENV183562604
OOBW01000333
291634
Bacillota
GAA
Phe
>WENV183562963
OOBW01006158
294020
Bacillota
TAC
Val
>WENV183562983
OOBW01007947
294020
Bacillota
TAC
Val
>WENV183562753
OOBW01000930
346451
Bacillota
TTT
Lys
>WENV183563018
OOBW01013768
295350
Bacillota
TGC
Ala
>WENV183562430
OOBW01000103
293309
Bacillota
GTT
Asn
>WENV183562225
OOBW01000005
480322
Bacillota
CTG
Gln
>WENV183562427
OOBW01000101
480322
Bacillota
CTG
Gln
>WENV183562586
OOBW01000301
480322
Bacillota
CTG
Gln
>WENV183562654
OOBW01000433
480322
Bacillota
CTG
Gln
>WENV183562658
OOBW01000439
480322
Bacillota
CTG
Gln
>WENV183562706
OOBW01000598
480322
Bacillota
CTG
Gln
>WENV183562356
OOBW01000060
175868
Bacillota
GTT
Asn
>WENV183562376
OOBW01000069
175868
Bacillota
GTT
Asn
>WENV183562496
OOBW01000159
175868
Bacillota
GTT
Asn
>WENV183562721
OOBW01000657
175868
Bacillota
GTT
Asn
>WENV183562750
OOBW01000908
175868
Bacillota
GTT
Asn
>WENV183562624
OOBW01000381
284744
Bacillota
TTT
Lys
>WENV183562786
OOBW01001261
322848
Bacillota
CTT
Lys
>WENV183563000
OOBW01009106
322848
Bacillota
CTT
Lys
>WENV183563016
OOBW01012690
322848
Bacillota
CTT
Lys
>WENV183562355
OOBW01000060
398854
Bacillota
CTC
Glu
>WENV183562375
OOBW01000069
398854
Bacillota
CTC
Glu
>WENV183562999
OOBW01009106
398854
Bacillota
CTC
Glu
>WENV183563015
OOBW01012690
398854
Bacillota
CTC
Glu
>WENV183562226
OOBW01000005
291576
Bacillota
CCC
Gly
>WENV183562268
OOBW01000018
291576
Bacillota
CCC
Gly
>WENV183562459
OOBW01000114
291576
Bacillota
CCC
Gly
>WENV183562426
OOBW01000101
480324
Bacillota
TTG
Gln
>WENV183562642
OOBW01000407
480324
Bacillota
TTG
Gln
>WENV183562708
OOBW01000598
480324
Bacillota
TTG
Gln
>WENV183562701
OOBW01000596
497729
Bacillota
CCA
Trp
>WENV183562883
OOBW01003147
497729
Bacillota
CCA
Trp
>WENV183562968
OOBW01006310
323864
Bacillota
TGC
Ala
>WENV183563033
OOBW01017136
292374
Bacillota
TGC
Ala
>WENV183563010
OOBW01010634
400600
Bacillota
TTG
Gln
>WENV183562627
OOBW01000381
179935
Bacillota
GTC
Asp
>WENV183562437
OOBW01000105
179935
Bacillota
GTC
Asp
>WENV183562924
OOBW01004498
398857
Bacillota
TTC
Glu
>WENV183562311
OOBW01000038
280444
Bacillota
GGT
Thr
>WENV183562369
OOBW01000067
280444
Bacillota
GGT
Thr
>WENV183562637
OOBW01000393
280444
Bacillota
GGT
Thr
>WENV183562639
OOBW01000393
280444
Bacillota
GGT
Thr
>WENV183562740
OOBW01000784
280444
Bacillota
GGT
Thr
>WENV183562741
OOBW01000784
280444
Bacillota
GGT
Thr
>WENV183562381
OOBW01000073
179755
Bacillota
CCG
Arg
>WENV183562393
OOBW01000084
179755
Bacillota
CCG
Arg
>WENV183562561
OOBW01000240
179755
Bacillota
CCG
Arg
>WENV183562444
OOBW01000105
401111
Bacillota
TTC
Glu
>WENV183562625
OOBW01000381
401111
Bacillota
TTC
Glu
>WENV183562815
OOBW01001496
58120
Bacillota
AAG
Leu
>WENV183562687
OOBW01000548
46835
Bacillota
TAA
Leu
>WENV183562438
OOBW01000105
284742
Bacillota
GAA
Phe
>WENV183562628
OOBW01000381
284742
Bacillota
GAA
Phe
>WENV183562380
OOBW01000073
398832
Bacillota
TTC
Glu
>WENV183562395
OOBW01000084
398832
Bacillota
TTC
Glu
>WENV183562560
OOBW01000240
398832
Bacillota
TTC
Glu
>WENV183562927
OOBW01004498
175915
Bacillota
GTC
Asp
>WENV183563022
OOBW01015071
294275
Bacillota
TGC
Ala
>WENV183562808
OOBW01001404
280476
Bacillota
TTT
Lys
>WENV183562491
OOBW01000154
289123
Bacillota
GGT
Thr
>WENV183562930
OOBW01004527
321248
Bacillota
TAC
Val
>WENV183562657
OOBW01000438
184539
Bacillota
TCT
Arg
>WENV183562855
OOBW01002145
175857
Bacillota
GTG
His
>WENV183562362
OOBW01000063
398833
Bacillota
TGT
Thr
>WENV183562508
OOBW01000175
398833
Bacillota
TGT
Thr
>WENV183562643
OOBW01000410
398833
Bacillota
TGT
Thr
>WENV183562739
OOBW01000784
175849
Bacillota
GTC
Asp
>WENV183562832
OOBW01001750
175849
Bacillota
GTC
Asp
>WENV183562310
OOBW01000038
175849
Bacillota
GTC
Asp
>WENV183562636
OOBW01000393
175849
Bacillota
GTC
Asp
>WENV183562688
OOBW01000555
175849
Bacillota
GTC
Asp
>WENV183562709
OOBW01000598
175849
Bacillota
GTC
Asp
>WENV183562805
OOBW01001404
179166
Bacillota
TCT
Arg
>WENV183562950
OOBW01005704
280486
Bacillota
TGC
Ala
>WENV183562763
OOBW01001049
405393
Bacillota
GCC
Gly
>WENV183563035
OOBW01017432
156219
Bacillota
GTG
His
>WENV183562357
OOBW01000060
56074
Bacillota
TGA
Ser
>WENV183562364
OOBW01000065
56074
Bacillota
TGA
Ser
>WENV183562451
OOBW01000110
56074
Bacillota
TGA
Ser
>WENV183563051
OOBW01021657
443965
Bacillota
>WENV183562308
OOBW01000038
280473
Bacillota
TGG
Pro
>WENV183563025
OOBW01015431
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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