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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
72 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183564132
OOBY01000405
179176
Bacillota
ACG
Arg
>WENV183564291
OOBY01001447
175831
Bacillota
ACG
Arg
>WENV183564145
OOBY01000463
175842
Bacillota
CAC
Val
>WENV183564296
OOBY01001524
175842
Bacillota
CAC
Val
>WENV183563945
OOBY01000093
73664
Bacillota
CAG
Leu
>WENV183564324
OOBY01002441
73009
Bacillota
CAG
Leu
>WENV183564508
OOBY01025668
176018
Bacillota
CAT
Met
>WENV183563971
OOBY01000120
215243
Bacillota
CAT
Met
>WENV183564406
OOBY01008442
215243
Bacillota
CAT
Met
>WENV183564189
OOBY01000631
190476
Bacillota
CAT
Met
>WENV183564311
OOBY01002086
190476
Bacillota
CAT
Met
>WENV183564105
OOBY01000332
497729
Bacillota
CCA
Trp
>WENV183564453
OOBY01016121
291576
Bacillota
CCC
Gly
>WENV183564534
OOBY01032099
483485
Bacillota
CCC
Gly
>WENV183564329
OOBY01002647
179755
Bacillota
CCG
Arg
>WENV183564360
OOBY01004330
179755
Bacillota
CCG
Arg
>WENV183564222
OOBY01000854
291581
Bacillota
CGG
Pro
>WENV183564309
OOBY01002075
398854
Bacillota
CTC
Glu
>WENV183564349
OOBY01003655
398854
Bacillota
CTC
Glu
>WENV183563859
OOBY01000037
398852
Bacillota
CTC
Glu
>WENV183563860
OOBY01000037
398852
Bacillota
CTC
Glu
>WENV183563861
OOBY01000037
398852
Bacillota
CTC
Glu
>WENV183563948
OOBY01000096
480322
Bacillota
CTG
Gln
>WENV183564221
OOBY01000854
480322
Bacillota
CTG
Gln
>WENV183564402
OOBY01007755
480322
Bacillota
CTG
Gln
>WENV183564121
OOBY01000393
280428
Bacillota
GAA
Phe
>WENV183564544
OOBY01035911
280428
Bacillota
GAA
Phe
>WENV183564305
OOBY01001893
280447
Bacillota
GAC
Val
>WENV183564326
OOBY01002495
280447
Bacillota
GAC
Val
>WENV183564348
OOBY01003635
280447
Bacillota
GAC
Val
>WENV183564415
OOBY01009707
201856
Bacillota
GAT
Ile
>WENV183564255
OOBY01001078
405363
Bacillota
GCA
Cys
>WENV183564122
OOBY01000393
349107
Bacillota
GCC
Gly
>WENV183564441
OOBY01013598
349107
Bacillota
GCC
Gly
>WENV183564117
OOBY01000371
321753
Bacillota
GCC
Gly
>WENV183564252
OOBY01001058
321753
Bacillota
GCC
Gly
>WENV183564140
OOBY01000433
27216
Bacillota
GCT
Ser
>WENV183564187
OOBY01000613
27216
Bacillota
GCT
Ser
>WENV183564188
OOBY01000627
184497
Bacillota
GGG
Pro
>WENV183564223
OOBY01000863
280444
Bacillota
GGT
Thr
>WENV183564001
OOBY01000160
118669
Bacillota
GTA
Tyr
>WENV183564130
OOBY01000401
118669
Bacillota
GTA
Tyr
>WENV183564520
OOBY01028027
175899
Bacillota
GTC
Asp
>WENV183564538
OOBY01035241
175915
Bacillota
GTC
Asp
>WENV183564543
OOBY01035911
175849
Bacillota
GTC
Asp
>WENV183564287
OOBY01001435
229015
Bacillota
GTG
His
>WENV183564099
OOBY01000311
175857
Bacillota
GTG
His
>WENV183564526
OOBY01028602
348419
Bacillota
GTT
Asn
>WENV183564081
OOBY01000270
175868
Bacillota
GTT
Asn
>WENV183564310
OOBY01002075
175868
Bacillota
GTT
Asn
>WENV183564350
OOBY01003655
175868
Bacillota
GTT
Asn
>WENV183564510
OOBY01026363
400963
Bacillota
GTT
Asn
>WENV183564540
OOBY01035241
82124
Bacillota
TAA
Leu
>WENV183564542
OOBY01035911
280466
Bacillota
TAC
Val
>WENV183564197
OOBY01000646
284723
Bacillota
TAC
Val
>WENV183564503
OOBY01025668
176014
Bacillota
TCT
Arg
>WENV183564294
OOBY01001460
179810
Bacillota
TCT
Arg
>WENV183564134
OOBY01000415
56074
Bacillota
TGA
Ser
>WENV183564374
OOBY01005312
295350
Bacillota
TGC
Ala
>WENV183563963
OOBY01000111
323864
Bacillota
TGC
Ala
>WENV183564416
OOBY01009707
292374
Bacillota
TGC
Ala
>WENV183564257
OOBY01001128
280473
Bacillota
TGG
Pro
>WENV183564330
OOBY01002687
280473
Bacillota
TGG
Pro
>WENV183564161
OOBY01000522
303718
Bacillota
TGT
Thr
>WENV183564527
OOBY01028602
398857
Bacillota
TTC
Glu
>WENV183564190
OOBY01000631
398832
Bacillota
TTC
Glu
>WENV183564312
OOBY01002086
398832
Bacillota
TTC
Glu
>WENV183564504
OOBY01025668
280642
Bacillota
TTG
Gln
>WENV183564288
OOBY01001435
401685
Bacillota
TTG
Gln
>WENV183564254
OOBY01001078
480324
Bacillota
TTG
Gln
>WENV183564259
OOBY01001150
480324
Bacillota
TTG
Gln
>WENV183564505
OOBY01025668
280639
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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