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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
103 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183570052
OOCD01000004
398852
Bacillota
CTC
Glu
>WENV183570063
OOCD01000014
56079
Bacillota
AAG
Leu
>WENV183570064
OOCD01000014
56079
Bacillota
AAG
Leu
>WENV183570065
OOCD01000014
73664
Bacillota
CAG
Leu
>WENV183570067
OOCD01000020
284627
Bacillota
GAA
Phe
>WENV183570076
OOCD01000031
187364
Bacillota
CAT
Met
>WENV183570077
OOCD01000032
398852
Bacillota
CTC
Glu
>WENV183570090
OOCD01000038
175857
Bacillota
GTG
His
>WENV183570092
OOCD01000038
280463
Bacillota
TTT
Lys
>WENV183570100
OOCD01000046
118669
Bacillota
GTA
Tyr
>WENV183570101
OOCD01000046
82124
Bacillota
TAA
Leu
>WENV183570125
OOCD01000072
46643
Bacillota
TGA
Ser
>WENV183570139
OOCD01000098
73664
Bacillota
CAG
Leu
>WENV183570142
OOCD01000103
73664
Bacillota
CAG
Leu
>WENV183570161
OOCD01000132
73009
Bacillota
CAG
Leu
>WENV183570162
OOCD01000134
117745
Bacillota
GTA
Tyr
>WENV183570164
OOCD01000139
398852
Bacillota
CTC
Glu
>WENV183570170
OOCD01000144
398832
Bacillota
TTC
Glu
>WENV183570172
OOCD01000144
398832
Bacillota
TTC
Glu
>WENV183570183
OOCD01000163
497729
Bacillota
CCA
Trp
>WENV183570192
OOCD01000181
406186
Bacillota
CTC
Glu
>WENV183570199
OOCD01000186
280427
Bacillota
TAC
Val
>WENV183570202
OOCD01000186
285756
Bacillota
GCC
Gly
>WENV183570203
OOCD01000188
280492
Bacillota
CTT
Lys
>WENV183570238
OOCD01000252
398833
Bacillota
TGT
Thr
>WENV183570240
OOCD01000253
343590
Bacillota
GCC
Gly
>WENV183570248
OOCD01000273
117745
Bacillota
GTA
Tyr
>WENV183570250
OOCD01000273
280462
Bacillota
GAA
Phe
>WENV183570251
OOCD01000273
280463
Bacillota
TTT
Lys
>WENV183570278
OOCD01000348
480324
Bacillota
TTG
Gln
>WENV183570283
OOCD01000368
483485
Bacillota
CCC
Gly
>WENV183570291
OOCD01000385
175859
Bacillota
TCT
Arg
>WENV183570306
OOCD01000438
175831
Bacillota
ACG
Arg
>WENV183570309
OOCD01000471
480322
Bacillota
CTG
Gln
>WENV183570315
OOCD01000482
280447
Bacillota
GAC
Val
>WENV183570321
OOCD01000509
480322
Bacillota
CTG
Gln
>WENV183570340
OOCD01000620
56074
Bacillota
TGA
Ser
>WENV183570341
OOCD01000620
5692
Bacillota
GCT
Ser
>WENV183570343
OOCD01000631
291576
Bacillota
CCC
Gly
>WENV183570346
OOCD01000647
398854
Bacillota
CTC
Glu
>WENV183570347
OOCD01000647
175868
Bacillota
GTT
Asn
>WENV183570364
OOCD01000734
280492
Bacillota
CTT
Lys
>WENV183570373
OOCD01000782
175868
Bacillota
GTT
Asn
>WENV183570388
OOCD01000935
398832
Bacillota
TTC
Glu
>WENV183570403
OOCD01001077
179917
Bacillota
CAT
Met
>WENV183570427
OOCD01001270
280444
Bacillota
GGT
Thr
>WENV183570432
OOCD01001313
284746
Bacillota
CTG
Gln
>WENV183570459
OOCD01001529
284744
Bacillota
TTT
Lys
>WENV183570460
OOCD01001529
401111
Bacillota
TTC
Glu
>WENV183570462
OOCD01001529
179935
Bacillota
GTC
Asp
>WENV183570463
OOCD01001529
284742
Bacillota
GAA
Phe
>WENV183570481
OOCD01001665
179755
Bacillota
CCG
Arg
>WENV183570483
OOCD01001666
175859
Bacillota
TCT
Arg
>WENV183570485
OOCD01001671
405363
Bacillota
GCA
Cys
>WENV183570487
OOCD01001687
175842
Bacillota
CAC
Val
>WENV183570509
OOCD01002001
175868
Bacillota
GTT
Asn
>WENV183570510
OOCD01002006
480322
Bacillota
CTG
Gln
>WENV183570511
OOCD01002006
291581
Bacillota
CGG
Pro
>WENV183570520
OOCD01002068
280473
Bacillota
TGG
Pro
>WENV183570527
OOCD01002199
291576
Bacillota
CCC
Gly
>WENV183570545
OOCD01002481
175842
Bacillota
CAC
Val
>WENV183570557
OOCD01002643
480324
Bacillota
TTG
Gln
>WENV183570561
OOCD01002764
480322
Bacillota
CTG
Gln
>WENV183570562
OOCD01002764
291581
Bacillota
CGG
Pro
>WENV183570592
OOCD01003334
291576
Bacillota
CCC
Gly
>WENV183570640
OOCD01004280
280473
Bacillota
TGG
Pro
>WENV183570644
OOCD01004386
56074
Bacillota
TGA
Ser
>WENV183570645
OOCD01004386
5692
Bacillota
GCT
Ser
>WENV183570731
OOCD01007266
280473
Bacillota
TGG
Pro
>WENV183570740
OOCD01007515
312274
Bacillota
GGC
Ala
>WENV183570755
OOCD01008458
73009
Bacillota
CAG
Leu
>WENV183570756
OOCD01008525
189473
Bacillota
GAT
Ile
>WENV183570768
OOCD01008890
280447
Bacillota
GAC
Val
>WENV183570803
OOCD01012048
322848
Bacillota
CTT
Lys
>WENV183570810
OOCD01012528
280427
Bacillota
TAC
Val
>WENV183570813
OOCD01012528
285756
Bacillota
GCC
Gly
>WENV183570823
OOCD01013220
179755
Bacillota
CCG
Arg
>WENV183570883
OOCD01017353
186123
Bacillota
GTC
Asp
>WENV183570884
OOCD01017353
291634
Bacillota
GAA
Phe
>WENV183570885
OOCD01017353
405393
Bacillota
GCC
Gly
>WENV183570910
OOCD01020715
179810
Bacillota
TCT
Arg
>WENV183570911
OOCD01020715
229015
Bacillota
GTG
His
>WENV183570914
OOCD01020870
179176
Bacillota
ACG
Arg
>WENV183571001
OOCD01034687
58120
Bacillota
AAG
Leu
>WENV183571033
OOCD01039936
175916
Bacillota
GAT
Ile
>WENV183571034
OOCD01039936
280500
Bacillota
TGC
Ala
>WENV183571037
OOCD01041178
176014
Bacillota
TCT
Arg
>WENV183571038
OOCD01041178
280642
Bacillota
TTG
Gln
>WENV183571039
OOCD01041178
280639
Bacillota
TTT
Lys
>WENV183571040
OOCD01041178
443965
Bacillota
>WENV183571041
OOCD01041178
298270
Bacillota
TAC
Val
>WENV183571043
OOCD01041178
418726
Bacillota
TGT
Thr
>WENV183571045
OOCD01041178
141454
Bacillota
TAG
Leu
>WENV183571046
OOCD01041178
398916
Bacillota
>WENV183571060
OOCD01044898
200563
Bacillota
TGG
Pro
>WENV183571071
OOCD01048341
280428
Bacillota
GAA
Phe
>WENV183571072
OOCD01048341
349107
Bacillota
GCC
Gly
>WENV183571074
OOCD01050581
332181
Bacillota
TGT
Thr
>WENV183571077
OOCD01050581
289123
Bacillota
GGT
Thr
>WENV183571087
OOCD01053668
201856
Bacillota
GAT
Ile
>WENV183571088
OOCD01053668
292374
Bacillota
TGC
Ala
>WENV183571098
OOCD01057731
295166
Bacillota
TGC
Ala
>WENV183571103
OOCD01059811
186051
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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