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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
101 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183571716
OOCE01037955
56079
Bacillota
AAG
Leu
>WENV183571218
OOCE01000104
175831
Bacillota
ACG
Arg
>WENV183571373
OOCE01001527
175831
Bacillota
ACG
Arg
>WENV183571356
OOCE01001272
175842
Bacillota
CAC
Val
>WENV183571588
OOCE01012711
175842
Bacillota
CAC
Val
>WENV183571592
OOCE01013970
175842
Bacillota
CAC
Val
>WENV183571612
OOCE01018660
175842
Bacillota
CAC
Val
>WENV183571743
OOCE01043328
73664
Bacillota
CAG
Leu
>WENV183571170
OOCE01000018
73009
Bacillota
CAG
Leu
>WENV183571322
OOCE01000869
73009
Bacillota
CAG
Leu
>WENV183571188
OOCE01000045
291576
Bacillota
CCC
Gly
>WENV183571292
OOCE01000690
291576
Bacillota
CCC
Gly
>WENV183571329
OOCE01000981
291576
Bacillota
CCC
Gly
>WENV183571393
OOCE01001813
179755
Bacillota
CCG
Arg
>WENV183571412
OOCE01002122
179755
Bacillota
CCG
Arg
>WENV183571666
OOCE01026593
179755
Bacillota
CCG
Arg
>WENV183571262
OOCE01000336
291581
Bacillota
CGG
Pro
>WENV183571486
OOCE01004838
291581
Bacillota
CGG
Pro
>WENV183571332
OOCE01001093
398854
Bacillota
CTC
Glu
>WENV183571459
OOCE01003512
398854
Bacillota
CTC
Glu
>WENV183571507
OOCE01005878
398854
Bacillota
CTC
Glu
>WENV183571584
OOCE01012405
398854
Bacillota
CTC
Glu
>WENV183571667
OOCE01026636
398854
Bacillota
CTC
Glu
>WENV183571223
OOCE01000114
480322
Bacillota
CTG
Gln
>WENV183571238
OOCE01000198
480322
Bacillota
CTG
Gln
>WENV183571261
OOCE01000336
480322
Bacillota
CTG
Gln
>WENV183571351
OOCE01001203
480322
Bacillota
CTG
Gln
>WENV183571200
OOCE01000074
280428
Bacillota
GAA
Phe
>WENV183571499
OOCE01005539
280428
Bacillota
GAA
Phe
>WENV183571529
OOCE01007187
280483
Bacillota
GAA
Phe
>WENV183571323
OOCE01000900
280447
Bacillota
GAC
Val
>WENV183571358
OOCE01001287
280447
Bacillota
GAC
Val
>WENV183571553
OOCE01009434
280447
Bacillota
GAC
Val
>WENV183571620
OOCE01019423
280447
Bacillota
GAC
Val
>WENV183571750
OOCE01046850
280447
Bacillota
GAC
Val
>WENV183571673
OOCE01029059
175825
Bacillota
GAT
Ile
>WENV183571608
OOCE01017242
405363
Bacillota
GCA
Cys
>WENV183571197
OOCE01000074
349107
Bacillota
GCC
Gly
>WENV183571201
OOCE01000074
349107
Bacillota
GCC
Gly
>WENV183571316
OOCE01000833
349107
Bacillota
GCC
Gly
>WENV183571364
OOCE01001420
349107
Bacillota
GCC
Gly
>WENV183571376
OOCE01001581
349107
Bacillota
GCC
Gly
>WENV183571390
OOCE01001735
349107
Bacillota
GCC
Gly
>WENV183571433
OOCE01002436
349107
Bacillota
GCC
Gly
>WENV183571439
OOCE01002587
349107
Bacillota
GCC
Gly
>WENV183571500
OOCE01005539
349107
Bacillota
GCC
Gly
>WENV183571520
OOCE01006827
349107
Bacillota
GCC
Gly
>WENV183571600
OOCE01015319
349107
Bacillota
GCC
Gly
>WENV183571607
OOCE01017242
349107
Bacillota
GCC
Gly
>WENV183571654
OOCE01022783
349107
Bacillota
GCC
Gly
>WENV183571530
OOCE01007187
285756
Bacillota
GCC
Gly
>WENV183571150
OOCE01000004
5692
Bacillota
GCT
Ser
>WENV183571417
OOCE01002154
5692
Bacillota
GCT
Ser
>WENV183571215
OOCE01000098
280444
Bacillota
GGT
Thr
>WENV183571386
OOCE01001662
280444
Bacillota
GGT
Thr
>WENV183571554
OOCE01009646
280444
Bacillota
GGT
Thr
>WENV183571675
OOCE01029217
280444
Bacillota
GGT
Thr
>WENV183571571
OOCE01011438
99852
Bacillota
GTA
Tyr
>WENV183571581
OOCE01012200
99852
Bacillota
GTA
Tyr
>WENV183571579
OOCE01011857
117745
Bacillota
GTA
Tyr
>WENV183571766
OOCE01052734
175847
Bacillota
GTC
Asp
>WENV183571731
OOCE01040677
175915
Bacillota
GTC
Asp
>WENV183571755
OOCE01049143
175915
Bacillota
GTC
Asp
>WENV183571199
OOCE01000074
175849
Bacillota
GTC
Asp
>WENV183571385
OOCE01001662
175849
Bacillota
GTC
Asp
>WENV183571674
OOCE01029217
175849
Bacillota
GTC
Asp
>WENV183571333
OOCE01001093
175868
Bacillota
GTT
Asn
>WENV183571460
OOCE01003512
175868
Bacillota
GTT
Asn
>WENV183571508
OOCE01005878
175868
Bacillota
GTT
Asn
>WENV183571732
OOCE01040677
46835
Bacillota
TAA
Leu
>WENV183571198
OOCE01000074
280466
Bacillota
TAC
Val
>WENV183571377
OOCE01001581
280466
Bacillota
TAC
Val
>WENV183571440
OOCE01002587
280466
Bacillota
TAC
Val
>WENV183571709
OOCE01037439
298270
Bacillota
TAC
Val
>WENV183571708
OOCE01037439
480359
Bacillota
TCC
Gly
>WENV183571176
OOCE01000022
175859
Bacillota
TCT
Arg
>WENV183571233
OOCE01000186
175859
Bacillota
TCT
Arg
>WENV183571275
OOCE01000457
175859
Bacillota
TCT
Arg
>WENV183571414
OOCE01002135
175859
Bacillota
TCT
Arg
>WENV183571652
OOCE01022611
175859
Bacillota
TCT
Arg
>WENV183571738
OOCE01042137
46643
Bacillota
TGA
Ser
>WENV183571416
OOCE01002154
56074
Bacillota
TGA
Ser
>WENV183571149
OOCE01000004
56074
Bacillota
TGA
Ser
>WENV183571685
OOCE01032320
280500
Bacillota
TGC
Ala
>WENV183571672
OOCE01029059
280436
Bacillota
TGC
Ala
>WENV183571566
OOCE01010974
323864
Bacillota
TGC
Ala
>WENV183571717
OOCE01038028
294275
Bacillota
TGC
Ala
>WENV183571239
OOCE01000208
280473
Bacillota
TGG
Pro
>WENV183571410
OOCE01002101
280473
Bacillota
TGG
Pro
>WENV183571482
OOCE01004477
280473
Bacillota
TGG
Pro
>WENV183571711
OOCE01037439
478081
Bacillota
TGT
Thr
>WENV183571167
OOCE01000015
398833
Bacillota
TGT
Thr
>WENV183571352
OOCE01001204
398833
Bacillota
TGT
Thr
>WENV183571472
OOCE01003944
398833
Bacillota
TGT
Thr
>WENV183571550
OOCE01009152
398833
Bacillota
TGT
Thr
>WENV183571175
OOCE01000021
398832
Bacillota
TTC
Glu
>WENV183571263
OOCE01000336
480324
Bacillota
TTG
Gln
>WENV183571272
OOCE01000387
480324
Bacillota
TTG
Gln
>WENV183571330
OOCE01000995
480324
Bacillota
TTG
Gln
>WENV183571479
OOCE01004349
480324
Bacillota
TTG
Gln
>WENV183571712
OOCE01037439
280639
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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