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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183573125
OOCG01002842
99852
Bacillota
GTA
Tyr
>WENV183573077
OOCG01002047
343590
Bacillota
GCC
Gly
>WENV183573245
OOCG01007523
234991
Bacillota
GAT
Ile
>WENV183573187
OOCG01004837
280500
Bacillota
TGC
Ala
>WENV183573089
OOCG01002177
349107
Bacillota
GCC
Gly
>WENV183573095
OOCG01002207
349107
Bacillota
GCC
Gly
>WENV183573102
OOCG01002354
349107
Bacillota
GCC
Gly
>WENV183573219
OOCG01006387
349107
Bacillota
GCC
Gly
>WENV183572965
OOCG01000986
405363
Bacillota
GCA
Cys
>WENV183573176
OOCG01004471
179917
Bacillota
CAT
Met
>WENV183573318
OOCG01014959
418726
Bacillota
TGT
Thr
>WENV183573118
OOCG01002651
175842
Bacillota
CAC
Val
>WENV183573312
OOCG01014224
175842
Bacillota
CAC
Val
>WENV183572855
OOCG01000471
287289
Bacillota
GCC
Gly
>WENV183572908
OOCG01000719
348419
Bacillota
GTT
Asn
>WENV183573244
OOCG01007523
295166
Bacillota
TGC
Ala
>WENV183573020
OOCG01001499
215243
Bacillota
CAT
Met
>WENV183573332
OOCG01019066
190476
Bacillota
CAT
Met
>WENV183572822
OOCG01000351
280447
Bacillota
GAC
Val
>WENV183572850
OOCG01000464
280447
Bacillota
GAC
Val
>WENV183572856
OOCG01000479
280447
Bacillota
GAC
Val
>WENV183573234
OOCG01007482
409321
Bacillota
TTC
Glu
>WENV183572732
OOCG01000115
186123
Bacillota
GTC
Asp
>WENV183573063
OOCG01001905
186123
Bacillota
GTC
Asp
>WENV183572924
OOCG01000780
73009
Bacillota
CAG
Leu
>WENV183573147
OOCG01003454
73009
Bacillota
CAG
Leu
>WENV183572876
OOCG01000591
291581
Bacillota
CGG
Pro
>WENV183573051
OOCG01001797
291581
Bacillota
CGG
Pro
>WENV183572743
OOCG01000160
175859
Bacillota
TCT
Arg
>WENV183572884
OOCG01000606
175847
Bacillota
GTC
Asp
>WENV183573317
OOCG01014959
280641
Bacillota
GTT
Asn
>WENV183573114
OOCG01002579
179810
Bacillota
TCT
Arg
>WENV183572878
OOCG01000606
284627
Bacillota
GAA
Phe
>WENV183573091
OOCG01002178
284627
Bacillota
GAA
Phe
>WENV183572752
OOCG01000190
291634
Bacillota
GAA
Phe
>WENV183572970
OOCG01001039
291634
Bacillota
GAA
Phe
>WENV183572802
OOCG01000287
346451
Bacillota
TTT
Lys
>WENV183573242
OOCG01007482
110240
Bacillota
GAG
Leu
>WENV183572875
OOCG01000591
480322
Bacillota
CTG
Gln
>WENV183572998
OOCG01001267
480322
Bacillota
CTG
Gln
>WENV183573155
OOCG01003852
480322
Bacillota
CTG
Gln
>WENV183573227
OOCG01006932
480322
Bacillota
CTG
Gln
>WENV183573269
OOCG01008800
480322
Bacillota
CTG
Gln
>WENV183573306
OOCG01013496
480322
Bacillota
CTG
Gln
>WENV183572794
OOCG01000274
175868
Bacillota
GTT
Asn
>WENV183573120
OOCG01002709
322848
Bacillota
CTT
Lys
>WENV183573296
OOCG01011645
322848
Bacillota
CTT
Lys
>WENV183573298
OOCG01011805
322848
Bacillota
CTT
Lys
>WENV183572979
OOCG01001123
291576
Bacillota
CCC
Gly
>WENV183573079
OOCG01002117
291576
Bacillota
CCC
Gly
>WENV183572964
OOCG01000986
480324
Bacillota
TTG
Gln
>WENV183573030
OOCG01001647
480324
Bacillota
TTG
Gln
>WENV183573295
OOCG01011359
480324
Bacillota
TTG
Gln
>WENV183573012
OOCG01001421
400963
Bacillota
GTT
Asn
>WENV183572783
OOCG01000255
175911
Bacillota
GTC
Asp
>WENV183573184
OOCG01004659
292374
Bacillota
TGC
Ala
>WENV183573236
OOCG01007482
179935
Bacillota
GTC
Asp
>WENV183573191
OOCG01005042
186051
Bacillota
GAT
Ile
>WENV183572712
OOCG01000081
280444
Bacillota
GGT
Thr
>WENV183572980
OOCG01001130
280444
Bacillota
GGT
Thr
>WENV183573070
OOCG01001953
280444
Bacillota
GGT
Thr
>WENV183573251
OOCG01007951
280444
Bacillota
GGT
Thr
>WENV183573255
OOCG01008091
280444
Bacillota
GGT
Thr
>WENV183573074
OOCG01001995
179755
Bacillota
CCG
Arg
>WENV183573257
OOCG01008457
179755
Bacillota
CCG
Arg
>WENV183573280
OOCG01010262
179755
Bacillota
CCG
Arg
>WENV183573237
OOCG01007482
284742
Bacillota
GAA
Phe
>WENV183573333
OOCG01019066
398832
Bacillota
TTC
Glu
>WENV183573183
OOCG01004659
201856
Bacillota
GAT
Ile
>WENV183572709
OOCG01000071
289123
Bacillota
GGT
Thr
>WENV183572933
OOCG01000810
184539
Bacillota
TCT
Arg
>WENV183573085
OOCG01002124
175857
Bacillota
GTG
His
>WENV183572807
OOCG01000302
398833
Bacillota
TGT
Thr
>WENV183572993
OOCG01001242
398833
Bacillota
TGT
Thr
>WENV183573285
OOCG01010403
280486
Bacillota
TGC
Ala
>WENV183572733
OOCG01000115
405393
Bacillota
GCC
Gly
>WENV183572753
OOCG01000190
405393
Bacillota
GCC
Gly
>WENV183572895
OOCG01000656
405393
Bacillota
GCC
Gly
>WENV183572803
OOCG01000294
56074
Bacillota
TGA
Ser
>WENV183572928
OOCG01000804
280473
Bacillota
TGG
Pro
>WENV183572944
OOCG01000860
280473
Bacillota
TGG
Pro
>WENV183573107
OOCG01002475
280473
Bacillota
TGG
Pro
>WENV183573157
OOCG01003876
280473
Bacillota
TGG
Pro
>WENV183573208
OOCG01005512
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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