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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
89 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183578928
OOCM01000001
332181
Bacillota
TGT
Thr
>WENV183578931
OOCM01000001
289123
Bacillota
GGT
Thr
>WENV183578927
OOCM01000001
405393
Bacillota
GCC
Gly
>WENV183578993
OOCM01000025
346451
Bacillota
TTT
Lys
>WENV183579019
OOCM01000052
346451
Bacillota
TTT
Lys
>WENV183579072
OOCM01000091
398852
Bacillota
CTC
Glu
>WENV183579093
OOCM01000123
291629
Bacillota
CCA
Trp
>WENV183579123
OOCM01000178
186123
Bacillota
GTC
Asp
>WENV183579124
OOCM01000178
291634
Bacillota
GAA
Phe
>WENV183579161
OOCM01000216
359682
Bacillota
TAC
Val
>WENV183579159
OOCM01000216
179935
Bacillota
GTC
Asp
>WENV183579160
OOCM01000216
284742
Bacillota
GAA
Phe
>WENV183579179
OOCM01000279
312274
Bacillota
GGC
Ala
>WENV183579187
OOCM01000297
280483
Bacillota
GAA
Phe
>WENV183579188
OOCM01000297
285756
Bacillota
GCC
Gly
>WENV183579202
OOCM01000311
175857
Bacillota
GTG
His
>WENV183579227
OOCM01000367
293309
Bacillota
GTT
Asn
>WENV183579236
OOCM01000371
118669
Bacillota
GTA
Tyr
>WENV183579282
OOCM01000487
284744
Bacillota
TTT
Lys
>WENV183579283
OOCM01000487
401111
Bacillota
TTC
Glu
>WENV183579338
OOCM01000607
58120
Bacillota
AAG
Leu
>WENV183579341
OOCM01000619
280447
Bacillota
GAC
Val
>WENV183579346
OOCM01000644
27216
Bacillota
GCT
Ser
>WENV183579381
OOCM01000760
175831
Bacillota
ACG
Arg
>WENV183579399
OOCM01000814
280447
Bacillota
GAC
Val
>WENV183579398
OOCM01000814
5692
Bacillota
GCT
Ser
>WENV183579397
OOCM01000814
56074
Bacillota
TGA
Ser
>WENV183579404
OOCM01000828
118669
Bacillota
GTA
Tyr
>WENV183579433
OOCM01000873
497729
Bacillota
CCA
Trp
>WENV183579454
OOCM01000966
284746
Bacillota
CTG
Gln
>WENV183579467
OOCM01001037
480324
Bacillota
TTG
Gln
>WENV183579474
OOCM01001068
407726
Bacillota
CTG
Gln
>WENV183579490
OOCM01001179
280473
Bacillota
TGG
Pro
>WENV183579505
OOCM01001210
175859
Bacillota
TCT
Arg
>WENV183579538
OOCM01001395
480322
Bacillota
CTG
Gln
>WENV183579549
OOCM01001448
401685
Bacillota
TTG
Gln
>WENV183579588
OOCM01001700
175859
Bacillota
TCT
Arg
>WENV183579629
OOCM01001950
398852
Bacillota
CTC
Glu
>WENV183579630
OOCM01001970
175868
Bacillota
GTT
Asn
>WENV183579641
OOCM01002057
291581
Bacillota
CGG
Pro
>WENV183579640
OOCM01002057
480322
Bacillota
CTG
Gln
>WENV183579655
OOCM01002211
349107
Bacillota
GCC
Gly
>WENV183579677
OOCM01002526
56079
Bacillota
AAG
Leu
>WENV183579683
OOCM01002613
280447
Bacillota
GAC
Val
>WENV183579695
OOCM01002796
480324
Bacillota
TTG
Gln
>WENV183579700
OOCM01002849
187364
Bacillota
CAT
Met
>WENV183579743
OOCM01003349
398833
Bacillota
TGT
Thr
>WENV183579751
OOCM01003497
179755
Bacillota
CCG
Arg
>WENV183579762
OOCM01003618
184497
Bacillota
GGG
Pro
>WENV183579769
OOCM01003675
190476
Bacillota
CAT
Met
>WENV183579770
OOCM01003675
398832
Bacillota
TTC
Glu
>WENV183579781
OOCM01003848
398833
Bacillota
TGT
Thr
>WENV183579788
OOCM01003997
5692
Bacillota
GCT
Ser
>WENV183579787
OOCM01003997
56074
Bacillota
TGA
Ser
>WENV183579795
OOCM01004199
280473
Bacillota
TGG
Pro
>WENV183579828
OOCM01004737
179755
Bacillota
CCG
Arg
>WENV183579834
OOCM01004846
291581
Bacillota
CGG
Pro
>WENV183579833
OOCM01004846
480322
Bacillota
CTG
Gln
>WENV183579835
OOCM01004855
99852
Bacillota
GTA
Tyr
>WENV183579840
OOCM01004998
175868
Bacillota
GTT
Asn
>WENV183579850
OOCM01005213
280444
Bacillota
GGT
Thr
>WENV183579857
OOCM01005317
481217
Bacillota
GCA
Cys
>WENV183579869
OOCM01005550
73009
Bacillota
CAG
Leu
>WENV183579872
OOCM01005625
480324
Bacillota
TTG
Gln
>WENV183579897
OOCM01006285
280500
Bacillota
TGC
Ala
>WENV183579902
OOCM01006492
330413
Bacillota
CTT
Lys
>WENV183579905
OOCM01006501
343590
Bacillota
GCC
Gly
>WENV183579909
OOCM01006645
418726
Bacillota
TGT
Thr
>WENV183579908
OOCM01006645
235661
Bacillota
GTC
Asp
>WENV183579950
OOCM01008749
179176
Bacillota
ACG
Arg
>WENV183579955
OOCM01009100
46835
Bacillota
TAA
Leu
>WENV183579981
OOCM01009849
405363
Bacillota
GCA
Cys
>WENV183580009
OOCM01011242
175849
Bacillota
GTC
Asp
>WENV183580013
OOCM01011523
303718
Bacillota
TGT
Thr
>WENV183580021
OOCM01011898
175842
Bacillota
CAC
Val
>WENV183580041
OOCM01013319
280473
Bacillota
TGG
Pro
>WENV183580056
OOCM01014195
187589
Bacillota
CAT
Met
>WENV183580077
OOCM01015335
280646
Bacillota
TGC
Ala
>WENV183580085
OOCM01016114
215243
Bacillota
CAT
Met
>WENV183580100
OOCM01017574
343590
Bacillota
GCC
Gly
>WENV183580120
OOCM01019748
348419
Bacillota
GTT
Asn
>WENV183580121
OOCM01019748
398857
Bacillota
TTC
Glu
>WENV183580134
OOCM01021703
280428
Bacillota
GAA
Phe
>WENV183580171
OOCM01027741
353153
Bacillota
TGC
Ala
>WENV183580254
OOCM01039781
280476
Bacillota
TTT
Lys
>WENV183580274
OOCM01045063
189473
Bacillota
GAT
Ile
>WENV183580311
OOCM01053783
480359
Bacillota
TCC
Gly
>WENV183580358
OOCM01069723
232161
Bacillota
ACG
Arg
>WENV183580384
OOCM01085585
291576
Bacillota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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