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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
140 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183581193
OOCN01004943
99852
Bacillota
GTA
Tyr
>WENV183581258
OOCN01009358
343590
Bacillota
GCC
Gly
>WENV183581346
OOCN01021554
280500
Bacillota
TGC
Ala
>WENV183580410
OOCN01000005
349107
Bacillota
GCC
Gly
>WENV183581288
OOCN01011825
184504
Bacillota
GTC
Asp
>WENV183580932
OOCN01001038
405363
Bacillota
GCA
Cys
>WENV183580569
OOCN01000111
281077
Bacillota
GTT
Asn
>WENV183580523
OOCN01000069
289472
Bacillota
TTC
Glu
>WENV183580409
OOCN01000005
280428
Bacillota
GAA
Phe
>WENV183580555
OOCN01000096
424998
Bacillota
GCC
Gly
>WENV183581272
OOCN01010436
480359
Bacillota
TCC
Gly
>WENV183580728
OOCN01000312
284746
Bacillota
CTG
Gln
>WENV183580549
OOCN01000090
183994
Bacillota
TCT
Arg
>WENV183580577
OOCN01000121
231532
Bacillota
ACG
Arg
>WENV183581036
OOCN01001773
175842
Bacillota
CAC
Val
>WENV183581045
OOCN01001811
175842
Bacillota
CAC
Val
>WENV183581270
OOCN01010436
280639
Bacillota
TTT
Lys
>WENV183581175
OOCN01004535
348419
Bacillota
GTT
Asn
>WENV183580729
OOCN01000320
184497
Bacillota
GGG
Pro
>WENV183580589
OOCN01000131
179176
Bacillota
ACG
Arg
>WENV183580692
OOCN01000262
101000
Bacillota
GTA
Tyr
>WENV183580779
OOCN01000450
190476
Bacillota
CAT
Met
>WENV183580808
OOCN01000546
190476
Bacillota
CAT
Met
>WENV183580690
OOCN01000262
184522
Bacillota
CCT
Arg
>WENV183580502
OOCN01000058
73664
Bacillota
CAG
Leu
>WENV183580901
OOCN01000894
280447
Bacillota
GAC
Val
>WENV183581081
OOCN01002170
280447
Bacillota
GAC
Val
>WENV183581110
OOCN01002682
280447
Bacillota
GAC
Val
>WENV183580603
OOCN01000146
5692
Bacillota
GCT
Ser
>WENV183581057
OOCN01001893
5692
Bacillota
GCT
Ser
>WENV183581173
OOCN01004431
5692
Bacillota
GCT
Ser
>WENV183581266
OOCN01009957
5692
Bacillota
GCT
Ser
>WENV183580683
OOCN01000246
47207
Bacillota
TGA
Ser
>WENV183580524
OOCN01000069
359682
Bacillota
TAC
Val
>WENV183580834
OOCN01000617
73009
Bacillota
CAG
Leu
>WENV183580971
OOCN01001312
73009
Bacillota
CAG
Leu
>WENV183580983
OOCN01001360
73009
Bacillota
CAG
Leu
>WENV183580994
OOCN01001381
73009
Bacillota
CAG
Leu
>WENV183580995
OOCN01001389
481217
Bacillota
GCA
Cys
>WENV183580695
OOCN01000262
183993
Bacillota
CAT
Met
>WENV183580934
OOCN01001053
291581
Bacillota
CGG
Pro
>WENV183580964
OOCN01001250
291581
Bacillota
CGG
Pro
>WENV183581093
OOCN01002416
291581
Bacillota
CGG
Pro
>WENV183580654
OOCN01000196
175859
Bacillota
TCT
Arg
>WENV183580668
OOCN01000219
175859
Bacillota
TCT
Arg
>WENV183580717
OOCN01000294
175859
Bacillota
TCT
Arg
>WENV183580719
OOCN01000294
175859
Bacillota
TCT
Arg
>WENV183581074
OOCN01002027
175859
Bacillota
TCT
Arg
>WENV183580694
OOCN01000262
289149
Bacillota
GGT
Thr
>WENV183580836
OOCN01000624
175831
Bacillota
ACG
Arg
>WENV183581234
OOCN01007313
175831
Bacillota
ACG
Arg
>WENV183581077
OOCN01002086
47166
Bacillota
CGA
Ser
>WENV183580528
OOCN01000070
179810
Bacillota
TCT
Arg
>WENV183581049
OOCN01001825
179810
Bacillota
TCT
Arg
>WENV183581027
OOCN01001659
284627
Bacillota
GAA
Phe
>WENV183580520
OOCN01000069
289147
Bacillota
GTT
Asn
>WENV183580786
OOCN01000465
289475
Bacillota
GTG
His
>WENV183580762
OOCN01000408
241041
Bacillota
CGG
Pro
>WENV183580764
OOCN01000408
241041
Bacillota
CGG
Pro
>WENV183580894
OOCN01000852
183957
Bacillota
CCT
Arg
>WENV183581298
OOCN01013620
295350
Bacillota
TGC
Ala
>WENV183581380
OOCN01034017
281302
Bacillota
GTG
His
>WENV183580785
OOCN01000465
20913
Bacillota
GCT
Ser
>WENV183581066
OOCN01001924
482449
Bacillota
TCC
Gly
>WENV183581345
OOCN01021554
175916
Bacillota
GAT
Ile
>WENV183580658
OOCN01000199
480322
Bacillota
CTG
Gln
>WENV183580851
OOCN01000712
480322
Bacillota
CTG
Gln
>WENV183580933
OOCN01001053
480322
Bacillota
CTG
Gln
>WENV183580963
OOCN01001250
480322
Bacillota
CTG
Gln
>WENV183581092
OOCN01002416
480322
Bacillota
CTG
Gln
>WENV183581051
OOCN01001825
401685
Bacillota
TTG
Gln
>WENV183580622
OOCN01000163
175868
Bacillota
GTT
Asn
>WENV183580816
OOCN01000552
175868
Bacillota
GTT
Asn
>WENV183581223
OOCN01006364
175868
Bacillota
GTT
Asn
>WENV183580547
OOCN01000090
200900
Bacillota
TGG
Pro
>WENV183580484
OOCN01000048
284744
Bacillota
TTT
Lys
>WENV183580553
OOCN01000096
184455
Bacillota
GTC
Asp
>WENV183581292
OOCN01012243
289476
Bacillota
CGT
Thr
>WENV183580557
OOCN01000096
48832
Bacillota
TAA
Leu
>WENV183580815
OOCN01000552
398854
Bacillota
CTC
Glu
>WENV183581222
OOCN01006364
398854
Bacillota
CTC
Glu
>WENV183580623
OOCN01000163
291576
Bacillota
CCC
Gly
>WENV183580895
OOCN01000853
291576
Bacillota
CCC
Gly
>WENV183581014
OOCN01001573
291576
Bacillota
CCC
Gly
>WENV183580539
OOCN01000081
480324
Bacillota
TTG
Gln
>WENV183580931
OOCN01001038
480324
Bacillota
TTG
Gln
>WENV183580962
OOCN01001250
480324
Bacillota
TTG
Gln
>WENV183581084
OOCN01002218
480324
Bacillota
TTG
Gln
>WENV183580975
OOCN01001319
497729
Bacillota
CCA
Trp
>WENV183581344
OOCN01021495
292374
Bacillota
TGC
Ala
>WENV183580521
OOCN01000069
403952
Bacillota
CTG
Gln
>WENV183580701
OOCN01000266
179935
Bacillota
GTC
Asp
>WENV183580743
OOCN01000362
280444
Bacillota
GGT
Thr
>WENV183581026
OOCN01001653
280444
Bacillota
GGT
Thr
>WENV183581184
OOCN01004696
280444
Bacillota
GGT
Thr
>WENV183581382
OOCN01034017
354380
Bacillota
TTT
Lys
>WENV183581004
OOCN01001458
342104
Bacillota
TAC
Val
>WENV183580967
OOCN01001293
321753
Bacillota
GCC
Gly
>WENV183580522
OOCN01000069
289745
Bacillota
TTT
Lys
>WENV183580778
OOCN01000446
179755
Bacillota
CCG
Arg
>WENV183581164
OOCN01003983
179755
Bacillota
CCG
Arg
>WENV183580485
OOCN01000048
401111
Bacillota
TTC
Glu
>WENV183580708
OOCN01000266
401111
Bacillota
TTC
Glu
>WENV183580753
OOCN01000376
58120
Bacillota
AAG
Leu
>WENV183580579
OOCN01000121
289154
Bacillota
CTT
Lys
>WENV183581368
OOCN01030639
344985
Bacillota
GAA
Phe
>WENV183580702
OOCN01000266
284742
Bacillota
GAA
Phe
>WENV183580780
OOCN01000450
398832
Bacillota
TTC
Glu
>WENV183580809
OOCN01000546
398832
Bacillota
TTC
Glu
>WENV183581379
OOCN01034017
203851
Bacillota
TCT
Arg
>WENV183580422
OOCN01000006
118669
Bacillota
GTA
Tyr
>WENV183581356
OOCN01026586
294275
Bacillota
TGC
Ala
>WENV183581358
OOCN01027632
52748
Bacillota
TGA
Ser
>WENV183581196
OOCN01005119
280476
Bacillota
TTT
Lys
>WENV183580406
OOCN01000004
398852
Bacillota
CTC
Glu
>WENV183580407
OOCN01000004
398852
Bacillota
CTC
Glu
>WENV183580408
OOCN01000004
398852
Bacillota
CTC
Glu
>WENV183580550
OOCN01000090
404085
Bacillota
CCG
Arg
>WENV183581343
OOCN01021495
201856
Bacillota
GAT
Ile
>WENV183581006
OOCN01001458
280483
Bacillota
GAA
Phe
>WENV183580573
OOCN01000114
183995
Bacillota
GGG
Pro
>WENV183580529
OOCN01000070
175857
Bacillota
GTG
His
>WENV183581050
OOCN01001825
175857
Bacillota
GTG
His
>WENV183580608
OOCN01000151
285756
Bacillota
GCC
Gly
>WENV183581007
OOCN01001458
285756
Bacillota
GCC
Gly
>WENV183580444
OOCN01000024
184523
Bacillota
GAC
Val
>WENV183580686
OOCN01000254
398833
Bacillota
TGT
Thr
>WENV183580985
OOCN01001362
398833
Bacillota
TGT
Thr
>WENV183580787
OOCN01000465
403766
Bacillota
TTG
Gln
>WENV183581025
OOCN01001653
175849
Bacillota
GTC
Asp
>WENV183580556
OOCN01000096
489283
Bacillota
GCA
Cys
>WENV183580602
OOCN01000146
56074
Bacillota
TGA
Ser
>WENV183581056
OOCN01001893
56074
Bacillota
TGA
Ser
>WENV183581172
OOCN01004431
56074
Bacillota
TGA
Ser
>WENV183581265
OOCN01009957
56074
Bacillota
TGA
Ser
>WENV183581271
OOCN01010436
443965
Bacillota
>WENV183580875
OOCN01000794
280473
Bacillota
TGG
Pro
>WENV183581079
OOCN01002152
280473
Bacillota
TGG
Pro
>WENV183581083
OOCN01002178
280473
Bacillota
TGG
Pro
>WENV183581155
OOCN01003624
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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