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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183587156
OOCT01012018
184537
Bacillota
ACG
Arg
>WENV183586769
OOCT01000360
175831
Bacillota
ACG
Arg
>WENV183586809
OOCT01000453
175842
Bacillota
CAC
Val
>WENV183587068
OOCT01002460
73009
Bacillota
CAG
Leu
>WENV183586687
OOCT01000265
215243
Bacillota
CAT
Met
>WENV183586966
OOCT01001179
190476
Bacillota
CAT
Met
>WENV183586567
OOCT01000116
291629
Bacillota
CCA
Trp
>WENV183586810
OOCT01000457
291576
Bacillota
CCC
Gly
>WENV183586908
OOCT01000710
179755
Bacillota
CCG
Arg
>WENV183586783
OOCT01000376
291581
Bacillota
CGG
Pro
>WENV183586970
OOCT01001199
398854
Bacillota
CTC
Glu
>WENV183587110
OOCT01004787
398852
Bacillota
CTC
Glu
>WENV183586939
OOCT01000913
284746
Bacillota
CTG
Gln
>WENV183586782
OOCT01000376
480322
Bacillota
CTG
Gln
>WENV183586949
OOCT01000980
480322
Bacillota
CTG
Gln
>WENV183587128
OOCT01007616
280492
Bacillota
CTT
Lys
>WENV183586901
OOCT01000698
280428
Bacillota
GAA
Phe
>WENV183587014
OOCT01001579
280428
Bacillota
GAA
Phe
>WENV183586849
OOCT01000534
284627
Bacillota
GAA
Phe
>WENV183586860
OOCT01000558
284627
Bacillota
GAA
Phe
>WENV183586565
OOCT01000116
291634
Bacillota
GAA
Phe
>WENV183586570
OOCT01000116
291634
Bacillota
GAA
Phe
>WENV183586780
OOCT01000371
291634
Bacillota
GAA
Phe
>WENV183587040
OOCT01002019
284742
Bacillota
GAA
Phe
>WENV183587120
OOCT01005703
280447
Bacillota
GAC
Val
>WENV183587103
OOCT01004542
201856
Bacillota
GAT
Ile
>WENV183587018
OOCT01001579
405363
Bacillota
GCA
Cys
>WENV183586872
OOCT01000583
343590
Bacillota
GCC
Gly
>WENV183586873
OOCT01000583
343590
Bacillota
GCC
Gly
>WENV183586902
OOCT01000698
349107
Bacillota
GCC
Gly
>WENV183586937
OOCT01000912
349107
Bacillota
GCC
Gly
>WENV183587015
OOCT01001579
349107
Bacillota
GCC
Gly
>WENV183587017
OOCT01001579
349107
Bacillota
GCC
Gly
>WENV183586682
OOCT01000259
287289
Bacillota
GCC
Gly
>WENV183586963
OOCT01001073
287289
Bacillota
GCC
Gly
>WENV183586698
OOCT01000270
321753
Bacillota
GCC
Gly
>WENV183586566
OOCT01000116
405393
Bacillota
GCC
Gly
>WENV183586571
OOCT01000116
405393
Bacillota
GCC
Gly
>WENV183586615
OOCT01000174
405393
Bacillota
GCC
Gly
>WENV183586767
OOCT01000356
5692
Bacillota
GCT
Ser
>WENV183587002
OOCT01001466
312274
Bacillota
GGC
Ala
>WENV183586692
OOCT01000268
280444
Bacillota
GGT
Thr
>WENV183586693
OOCT01000268
280444
Bacillota
GGT
Thr
>WENV183586752
OOCT01000322
289123
Bacillota
GGT
Thr
>WENV183587019
OOCT01001579
99852
Bacillota
GTA
Tyr
>WENV183586847
OOCT01000534
118669
Bacillota
GTA
Tyr
>WENV183586862
OOCT01000558
118669
Bacillota
GTA
Tyr
>WENV183586564
OOCT01000116
186123
Bacillota
GTC
Asp
>WENV183586569
OOCT01000116
186123
Bacillota
GTC
Asp
>WENV183586779
OOCT01000371
186123
Bacillota
GTC
Asp
>WENV183586844
OOCT01000534
175847
Bacillota
GTC
Asp
>WENV183587138
OOCT01008637
175847
Bacillota
GTC
Asp
>WENV183586704
OOCT01000280
175911
Bacillota
GTC
Asp
>WENV183586858
OOCT01000557
175911
Bacillota
GTC
Asp
>WENV183587039
OOCT01002019
179935
Bacillota
GTC
Asp
>WENV183586691
OOCT01000268
175849
Bacillota
GTC
Asp
>WENV183586938
OOCT01000912
175849
Bacillota
GTC
Asp
>WENV183587016
OOCT01001579
175849
Bacillota
GTC
Asp
>WENV183586826
OOCT01000493
175857
Bacillota
GTG
His
>WENV183586971
OOCT01001199
175868
Bacillota
GTT
Asn
>WENV183586660
OOCT01000234
510477
Bacillota
TCC
Gly
>WENV183586825
OOCT01000493
179810
Bacillota
TCT
Arg
>WENV183586766
OOCT01000356
56074
Bacillota
TGA
Ser
>WENV183587125
OOCT01006521
280500
Bacillota
TGC
Ala
>WENV183586930
OOCT01000899
295350
Bacillota
TGC
Ala
>WENV183587104
OOCT01004542
292374
Bacillota
TGC
Ala
>WENV183587154
OOCT01010712
280486
Bacillota
TGC
Ala
>WENV183587036
OOCT01001897
280473
Bacillota
TGG
Pro
>WENV183586749
OOCT01000322
332181
Bacillota
TGT
Thr
>WENV183586879
OOCT01000596
303718
Bacillota
TGT
Thr
>WENV183586994
OOCT01001421
398833
Bacillota
TGT
Thr
>WENV183586688
OOCT01000265
460732
Bacillota
TTC
Glu
>WENV183586990
OOCT01001336
401111
Bacillota
TTC
Glu
>WENV183587046
OOCT01002019
401111
Bacillota
TTC
Glu
>WENV183586967
OOCT01001179
398832
Bacillota
TTC
Glu
>WENV183586625
OOCT01000190
346451
Bacillota
TTT
Lys
>WENV183586744
OOCT01000307
346451
Bacillota
TTT
Lys
>WENV183586989
OOCT01001336
284744
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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