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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183587849
OOCU01003117
99852
Bacillota
GTA
Tyr
>WENV183587965
OOCU01010488
99852
Bacillota
GTA
Tyr
>WENV183587907
OOCU01005311
280500
Bacillota
TGC
Ala
>WENV183587899
OOCU01005117
405363
Bacillota
GCA
Cys
>WENV183587284
OOCU01000036
281077
Bacillota
GTT
Asn
>WENV183587945
OOCU01007677
280428
Bacillota
GAA
Phe
>WENV183587952
OOCU01008153
221826
Bacillota
ACG
Arg
>WENV183588047
OOCU01026081
480359
Bacillota
TCC
Gly
>WENV183587645
OOCU01000636
284746
Bacillota
CTG
Gln
>WENV183588045
OOCU01026081
418726
Bacillota
TGT
Thr
>WENV183587711
OOCU01000908
287289
Bacillota
GCC
Gly
>WENV183588005
OOCU01016695
236579
Bacillota
GAT
Ile
>WENV183588004
OOCU01016695
295166
Bacillota
TGC
Ala
>WENV183587451
OOCU01000198
215243
Bacillota
CAT
Met
>WENV183587504
OOCU01000267
215243
Bacillota
CAT
Met
>WENV183588014
OOCU01018645
215243
Bacillota
CAT
Met
>WENV183587851
OOCU01003130
190476
Bacillota
CAT
Met
>WENV183588036
OOCU01022546
20942
Bacillota
GGA
Ser
>WENV183587763
OOCU01001535
280447
Bacillota
GAC
Val
>WENV183587883
OOCU01004559
5692
Bacillota
GCT
Ser
>WENV183587804
OOCU01001970
284723
Bacillota
TAC
Val
>WENV183587674
OOCU01000736
73009
Bacillota
CAG
Leu
>WENV183587414
OOCU01000145
481217
Bacillota
GCA
Cys
>WENV183587881
OOCU01004454
481217
Bacillota
GCA
Cys
>WENV183587801
OOCU01001947
291581
Bacillota
CGG
Pro
>WENV183587961
OOCU01008951
398835
Bacillota
GCC
Gly
>WENV183588044
OOCU01026081
280641
Bacillota
GTT
Asn
>WENV183587731
OOCU01001179
175831
Bacillota
ACG
Arg
>WENV183588012
OOCU01017721
353153
Bacillota
TGC
Ala
>WENV183587871
OOCU01003869
295350
Bacillota
TGC
Ala
>WENV183587800
OOCU01001947
480322
Bacillota
CTG
Gln
>WENV183587826
OOCU01002589
175868
Bacillota
GTT
Asn
>WENV183587962
OOCU01009124
175868
Bacillota
GTT
Asn
>WENV183587646
OOCU01000638
284744
Bacillota
TTT
Lys
>WENV183587888
OOCU01004624
284744
Bacillota
TTT
Lys
>WENV183587847
OOCU01002992
322848
Bacillota
CTT
Lys
>WENV183587825
OOCU01002589
398854
Bacillota
CTC
Glu
>WENV183587893
OOCU01004847
291576
Bacillota
CCC
Gly
>WENV183587805
OOCU01001990
480324
Bacillota
TTG
Gln
>WENV183587929
OOCU01006682
497729
Bacillota
CCA
Trp
>WENV183587402
OOCU01000129
303718
Bacillota
TGT
Thr
>WENV183587913
OOCU01005691
73638
Bacillota
AAG
Leu
>WENV183587501
OOCU01000259
175911
Bacillota
GTC
Asp
>WENV183587706
OOCU01000873
175911
Bacillota
GTC
Asp
>WENV183587988
OOCU01013658
292374
Bacillota
TGC
Ala
>WENV183587514
OOCU01000272
179935
Bacillota
GTC
Asp
>WENV183587649
OOCU01000638
179935
Bacillota
GTC
Asp
>WENV183587278
OOCU01000034
398857
Bacillota
TTC
Glu
>WENV183587485
OOCU01000248
398857
Bacillota
TTC
Glu
>WENV183587764
OOCU01001558
280444
Bacillota
GGT
Thr
>WENV183588053
OOCU01027149
291597
Bacillota
TGC
Ala
>WENV183587424
OOCU01000161
321753
Bacillota
GCC
Gly
>WENV183587578
OOCU01000411
321753
Bacillota
GCC
Gly
>WENV183587785
OOCU01001750
179755
Bacillota
CCG
Arg
>WENV183587521
OOCU01000272
401111
Bacillota
TTC
Glu
>WENV183587647
OOCU01000638
401111
Bacillota
TTC
Glu
>WENV183587889
OOCU01004624
401111
Bacillota
TTC
Glu
>WENV183587969
OOCU01011460
58120
Bacillota
AAG
Leu
>WENV183587515
OOCU01000272
284742
Bacillota
GAA
Phe
>WENV183587650
OOCU01000638
284742
Bacillota
GAA
Phe
>WENV183587852
OOCU01003130
398832
Bacillota
TTC
Glu
>WENV183587860
OOCU01003498
25955
Bacillota
GCT
Ser
>WENV183587842
OOCU01002853
280476
Bacillota
TTT
Lys
>WENV183588007
OOCU01016775
332651
Bacillota
GTT
Asn
>WENV183587682
OOCU01000780
118359
Bacillota
GTA
Tyr
>WENV183587987
OOCU01013658
201856
Bacillota
GAT
Ile
>WENV183587876
OOCU01004114
321248
Bacillota
TAC
Val
>WENV183587665
OOCU01000714
398833
Bacillota
TGT
Thr
>WENV183588011
OOCU01017353
280486
Bacillota
TGC
Ala
>WENV183587882
OOCU01004559
56074
Bacillota
TGA
Ser
>WENV183587870
OOCU01003837
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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