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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183591966
OOCY01003031
56079
Bacillota
AAG
Leu
>WENV183591968
OOCY01003099
179176
Bacillota
ACG
Arg
>WENV183591882
OOCY01001552
175831
Bacillota
ACG
Arg
>WENV183591852
OOCY01001374
175842
Bacillota
CAC
Val
>WENV183591688
OOCY01000521
73009
Bacillota
CAG
Leu
>WENV183591738
OOCY01000681
73009
Bacillota
CAG
Leu
>WENV183591292
OOCY01000023
179917
Bacillota
CAT
Met
>WENV183591809
OOCY01001083
190476
Bacillota
CAT
Met
>WENV183591643
OOCY01000388
291629
Bacillota
CCA
Trp
>WENV183592054
OOCY01009401
497729
Bacillota
CCA
Trp
>WENV183591298
OOCY01000025
291576
Bacillota
CCC
Gly
>WENV183591777
OOCY01000810
179755
Bacillota
CCG
Arg
>WENV183591693
OOCY01000532
291581
Bacillota
CGG
Pro
>WENV183591707
OOCY01000597
398854
Bacillota
CTC
Glu
>WENV183591393
OOCY01000078
480322
Bacillota
CTG
Gln
>WENV183591692
OOCY01000532
480322
Bacillota
CTG
Gln
>WENV183591596
OOCY01000310
280428
Bacillota
GAA
Phe
>WENV183591868
OOCY01001486
280428
Bacillota
GAA
Phe
>WENV183591293
OOCY01000023
302145
Bacillota
GAA
Phe
>WENV183591508
OOCY01000194
302145
Bacillota
GAA
Phe
>WENV183591652
OOCY01000409
291634
Bacillota
GAA
Phe
>WENV183591763
OOCY01000764
280447
Bacillota
GAC
Val
>WENV183591993
OOCY01004100
280447
Bacillota
GAC
Val
>WENV183592037
OOCY01007043
175825
Bacillota
GAT
Ile
>WENV183592013
OOCY01005412
175916
Bacillota
GAT
Ile
>WENV183592125
OOCY01020930
201856
Bacillota
GAT
Ile
>WENV183591872
OOCY01001486
405363
Bacillota
GCA
Cys
>WENV183591915
OOCY01001942
481217
Bacillota
GCA
Cys
>WENV183591953
OOCY01002765
481217
Bacillota
GCA
Cys
>WENV183591593
OOCY01000310
349107
Bacillota
GCC
Gly
>WENV183591597
OOCY01000310
349107
Bacillota
GCC
Gly
>WENV183591869
OOCY01001486
349107
Bacillota
GCC
Gly
>WENV183591871
OOCY01001486
349107
Bacillota
GCC
Gly
>WENV183592115
OOCY01017939
398835
Bacillota
GCC
Gly
>WENV183592065
OOCY01010631
283367
Bacillota
GCC
Gly
>WENV183591587
OOCY01000297
405393
Bacillota
GCC
Gly
>WENV183591642
OOCY01000388
405393
Bacillota
GCC
Gly
>WENV183591770
OOCY01000794
405393
Bacillota
GCC
Gly
>WENV183591469
OOCY01000166
5692
Bacillota
GCT
Ser
>WENV183591630
OOCY01000367
27216
Bacillota
GCT
Ser
>WENV183592093
OOCY01013733
25955
Bacillota
GCT
Ser
>WENV183591935
OOCY01002455
312274
Bacillota
GGC
Ala
>WENV183591936
OOCY01002470
184497
Bacillota
GGG
Pro
>WENV183591571
OOCY01000269
280444
Bacillota
GGT
Thr
>WENV183591909
OOCY01001863
280444
Bacillota
GGT
Thr
>WENV183591362
OOCY01000058
289123
Bacillota
GGT
Thr
>WENV183591621
OOCY01000352
99852
Bacillota
GTA
Tyr
>WENV183591873
OOCY01001486
99852
Bacillota
GTA
Tyr
>WENV183591641
OOCY01000388
186123
Bacillota
GTC
Asp
>WENV183591651
OOCY01000409
186123
Bacillota
GTC
Asp
>WENV183591570
OOCY01000269
175849
Bacillota
GTC
Asp
>WENV183591595
OOCY01000310
175849
Bacillota
GTC
Asp
>WENV183591870
OOCY01001486
175849
Bacillota
GTC
Asp
>WENV183591708
OOCY01000597
175868
Bacillota
GTT
Asn
>WENV183591889
OOCY01001650
175868
Bacillota
GTT
Asn
>WENV183591818
OOCY01001150
298260
Bacillota
GTT
Asn
>WENV183592015
OOCY01005467
46835
Bacillota
TAA
Leu
>WENV183591433
OOCY01000128
290391
Bacillota
TAC
Val
>WENV183591594
OOCY01000310
280466
Bacillota
TAC
Val
>WENV183591492
OOCY01000175
510477
Bacillota
TCC
Gly
>WENV183591663
OOCY01000430
228119
Bacillota
TCT
Arg
>WENV183591408
OOCY01000085
175859
Bacillota
TCT
Arg
>WENV183591472
OOCY01000167
179166
Bacillota
TCT
Arg
>WENV183591705
OOCY01000585
52748
Bacillota
TGA
Ser
>WENV183591786
OOCY01000902
52748
Bacillota
TGA
Ser
>WENV183591895
OOCY01001678
52748
Bacillota
TGA
Ser
>WENV183591468
OOCY01000166
56074
Bacillota
TGA
Ser
>WENV183592014
OOCY01005412
280500
Bacillota
TGC
Ala
>WENV183592036
OOCY01007043
280436
Bacillota
TGC
Ala
>WENV183592137
OOCY01025337
291597
Bacillota
TGC
Ala
>WENV183591790
OOCY01000938
280473
Bacillota
TGG
Pro
>WENV183591359
OOCY01000058
332181
Bacillota
TGT
Thr
>WENV183591395
OOCY01000079
398833
Bacillota
TGT
Thr
>WENV183591480
OOCY01000170
285556
Bacillota
TGT
Thr
>WENV183592132
OOCY01023257
398857
Bacillota
TTC
Glu
>WENV183591810
OOCY01001083
398832
Bacillota
TTC
Glu
>WENV183591691
OOCY01000532
480324
Bacillota
TTG
Gln
>WENV183591447
OOCY01000140
346451
Bacillota
TTT
Lys
>WENV183591624
OOCY01000353
346451
Bacillota
TTT
Lys
>WENV183591585
OOCY01000293
280476
Bacillota
TTT
Lys
>WENV183591659
OOCY01000430
280476
Bacillota
TTT
Lys
>WENV183591690
OOCY01000531
280476
Bacillota
TTT
Lys
>WENV183591717
OOCY01000609
280476
Bacillota
TTT
Lys
>WENV183592087
OOCY01012898
280476
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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