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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
150 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183594080
OODB01003784
99852
Bacillota
GTA
Tyr
>WENV183594143
OODB01005174
99852
Bacillota
GTA
Tyr
>WENV183594522
OODB01052035
280500
Bacillota
TGC
Ala
>WENV183593935
OODB01001861
405363
Bacillota
GCA
Cys
>WENV183593692
OODB01000519
290391
Bacillota
TAC
Val
>WENV183593910
OODB01001592
290391
Bacillota
TAC
Val
>WENV183593775
OODB01000789
280428
Bacillota
GAA
Phe
>WENV183593931
OODB01001861
280428
Bacillota
GAA
Phe
>WENV183593778
OODB01000791
291579
Bacillota
GAA
Phe
>WENV183594536
OODB01055584
141454
Bacillota
TAG
Leu
>WENV183593755
OODB01000742
280492
Bacillota
CTT
Lys
>WENV183594539
OODB01055584
280642
Bacillota
TTG
Gln
>WENV183593821
OODB01000967
175842
Bacillota
CAC
Val
>WENV183593856
OODB01001186
175842
Bacillota
CAC
Val
>WENV183593998
OODB01002561
175842
Bacillota
CAC
Val
>WENV183594334
OODB01013275
175842
Bacillota
CAC
Val
>WENV183593349
OODB01000006
184497
Bacillota
GGG
Pro
>WENV183594117
OODB01004485
184497
Bacillota
GGG
Pro
>WENV183594546
OODB01056818
281015
Bacillota
GTG
His
>WENV183593671
OODB01000454
179176
Bacillota
ACG
Arg
>WENV183594066
OODB01003548
184687
Bacillota
CAT
Met
>WENV183594014
OODB01002705
295166
Bacillota
TGC
Ala
>WENV183594549
OODB01056818
141334
Bacillota
TAG
Leu
>WENV183593587
OODB01000261
190476
Bacillota
CAT
Met
>WENV183593736
OODB01000676
190476
Bacillota
CAT
Met
>WENV183594261
OODB01009123
190476
Bacillota
CAT
Met
>WENV183594538
OODB01055584
176014
Bacillota
TCT
Arg
>WENV183594537
OODB01055584
398916
Bacillota
>WENV183593439
OODB01000062
73664
Bacillota
CAG
Leu
>WENV183593783
OODB01000811
280447
Bacillota
GAC
Val
>WENV183593849
OODB01001140
280447
Bacillota
GAC
Val
>WENV183593877
OODB01001323
280447
Bacillota
GAC
Val
>WENV183593926
OODB01001826
280447
Bacillota
GAC
Val
>WENV183594241
OODB01008396
280447
Bacillota
GAC
Val
>WENV183593591
OODB01000262
5692
Bacillota
GCT
Ser
>WENV183593855
OODB01001181
5692
Bacillota
GCT
Ser
>WENV183594026
OODB01002900
5692
Bacillota
GCT
Ser
>WENV183594126
OODB01004705
5692
Bacillota
GCT
Ser
>WENV183594353
OODB01014556
5692
Bacillota
GCT
Ser
>WENV183593871
OODB01001290
284723
Bacillota
TAC
Val
>WENV183593569
OODB01000239
73009
Bacillota
CAG
Leu
>WENV183593633
OODB01000377
73009
Bacillota
CAG
Leu
>WENV183593635
OODB01000377
73009
Bacillota
CAG
Leu
>WENV183593997
OODB01002546
73009
Bacillota
CAG
Leu
>WENV183594033
OODB01003012
73009
Bacillota
CAG
Leu
>WENV183594500
OODB01044713
481217
Bacillota
GCA
Cys
>WENV183594548
OODB01056818
283502
Bacillota
TTT
Lys
>WENV183594210
OODB01007127
280646
Bacillota
TGC
Ala
>WENV183593895
OODB01001518
291581
Bacillota
CGG
Pro
>WENV183594192
OODB01006633
291581
Bacillota
CGG
Pro
>WENV183593739
OODB01000682
175859
Bacillota
TCT
Arg
>WENV183593790
OODB01000829
175859
Bacillota
TCT
Arg
>WENV183593812
OODB01000936
175859
Bacillota
TCT
Arg
>WENV183594041
OODB01003189
175859
Bacillota
TCT
Arg
>WENV183594199
OODB01006877
175859
Bacillota
TCT
Arg
>WENV183594095
OODB01004187
21311
Bacillota
GCT
Ser
>WENV183593760
OODB01000757
175831
Bacillota
ACG
Arg
>WENV183593557
OODB01000220
284627
Bacillota
GAA
Phe
>WENV183594348
OODB01014192
284627
Bacillota
GAA
Phe
>WENV183593716
OODB01000587
294020
Bacillota
TAC
Val
>WENV183593826
OODB01000984
294020
Bacillota
TAC
Val
>WENV183594531
OODB01053248
295350
Bacillota
TGC
Ala
>WENV183594082
OODB01003876
484885
Bacillota
TCC
Gly
>WENV183593390
OODB01000032
480322
Bacillota
CTG
Gln
>WENV183593777
OODB01000790
480322
Bacillota
CTG
Gln
>WENV183593894
OODB01001518
480322
Bacillota
CTG
Gln
>WENV183594043
OODB01003241
480322
Bacillota
CTG
Gln
>WENV183594115
OODB01004468
480322
Bacillota
CTG
Gln
>WENV183594130
OODB01004869
480322
Bacillota
CTG
Gln
>WENV183594191
OODB01006633
480322
Bacillota
CTG
Gln
>WENV183594238
OODB01008284
480322
Bacillota
CTG
Gln
>WENV183593792
OODB01000835
175868
Bacillota
GTT
Asn
>WENV183593937
OODB01001883
175868
Bacillota
GTT
Asn
>WENV183594036
OODB01003050
175868
Bacillota
GTT
Asn
>WENV183594157
OODB01005300
175868
Bacillota
GTT
Asn
>WENV183594361
OODB01015060
175868
Bacillota
GTT
Asn
>WENV183594437
OODB01026165
119278
Bacillota
TAG
Leu
>WENV183594035
OODB01003050
398854
Bacillota
CTC
Glu
>WENV183594360
OODB01015060
398854
Bacillota
CTC
Glu
>WENV183593655
OODB01000416
291576
Bacillota
CCC
Gly
>WENV183594111
OODB01004349
291576
Bacillota
CCC
Gly
>WENV183594129
OODB01004833
291576
Bacillota
CCC
Gly
>WENV183594180
OODB01006031
291576
Bacillota
CCC
Gly
>WENV183593878
OODB01001344
480324
Bacillota
TTG
Gln
>WENV183593882
OODB01001393
480324
Bacillota
TTG
Gln
>WENV183594016
OODB01002739
480324
Bacillota
TTG
Gln
>WENV183594218
OODB01007495
480324
Bacillota
TTG
Gln
>WENV183593437
OODB01000062
56079
Bacillota
AAG
Leu
>WENV183593438
OODB01000062
56079
Bacillota
AAG
Leu
>WENV183594457
OODB01030327
186051
Bacillota
GAT
Ile
>WENV183594532
OODB01053248
186051
Bacillota
GAT
Ile
>WENV183593549
OODB01000205
117745
Bacillota
GTA
Tyr
>WENV183593462
OODB01000097
280444
Bacillota
GGT
Thr
>WENV183593465
OODB01000097
280444
Bacillota
GGT
Thr
>WENV183593610
OODB01000331
280444
Bacillota
GGT
Thr
>WENV183593687
OODB01000510
280444
Bacillota
GGT
Thr
>WENV183593689
OODB01000510
280444
Bacillota
GGT
Thr
>WENV183594124
OODB01004688
280444
Bacillota
GGT
Thr
>WENV183594205
OODB01006985
280444
Bacillota
GGT
Thr
>WENV183593616
OODB01000347
46643
Bacillota
TGA
Ser
>WENV183593589
OODB01000261
179755
Bacillota
CCG
Arg
>WENV183593761
OODB01000759
179755
Bacillota
CCG
Arg
>WENV183593799
OODB01000849
179755
Bacillota
CCG
Arg
>WENV183593914
OODB01001602
179755
Bacillota
CCG
Arg
>WENV183594142
OODB01005141
179755
Bacillota
CCG
Arg
>WENV183594147
OODB01005228
179755
Bacillota
CCG
Arg
>WENV183594313
OODB01011965
179755
Bacillota
CCG
Arg
>WENV183594048
OODB01003295
58120
Bacillota
AAG
Leu
>WENV183593416
OODB01000045
46835
Bacillota
TAA
Leu
>WENV183594552
OODB01057139
46835
Bacillota
TAA
Leu
>WENV183593588
OODB01000261
398832
Bacillota
TTC
Glu
>WENV183593737
OODB01000676
398832
Bacillota
TTC
Glu
>WENV183594262
OODB01009123
398832
Bacillota
TTC
Glu
>WENV183594545
OODB01056818
203851
Bacillota
TCT
Arg
>WENV183593555
OODB01000220
118669
Bacillota
GTA
Tyr
>WENV183593670
OODB01000443
118669
Bacillota
GTA
Tyr
>WENV183594217
OODB01007392
280561
Bacillota
CAT
Met
>WENV183594507
OODB01047441
282755
Bacillota
GGT
Thr
>WENV183593734
OODB01000651
280476
Bacillota
TTT
Lys
>WENV183593805
OODB01000901
280476
Bacillota
TTT
Lys
>WENV183593848
OODB01001114
280476
Bacillota
TTT
Lys
>WENV183593434
OODB01000060
398852
Bacillota
CTC
Glu
>WENV183593435
OODB01000060
398852
Bacillota
CTC
Glu
>WENV183593436
OODB01000060
398852
Bacillota
CTC
Glu
>WENV183593550
OODB01000205
398852
Bacillota
CTC
Glu
>WENV183593678
OODB01000474
398852
Bacillota
CTC
Glu
>WENV183593864
OODB01001223
398852
Bacillota
CTC
Glu
>WENV183594307
OODB01011886
399260
Bacillota
TGT
Thr
>WENV183593524
OODB01000165
312380
Bacillota
TAC
Val
>WENV183593526
OODB01000165
280483
Bacillota
GAA
Phe
>WENV183594106
OODB01004236
298260
Bacillota
GTT
Asn
>WENV183594347
OODB01014188
285601
Bacillota
TTC
Glu
>WENV183593665
OODB01000428
175857
Bacillota
GTG
His
>WENV183593527
OODB01000165
285756
Bacillota
GCC
Gly
>WENV183593880
OODB01001375
398833
Bacillota
TGT
Thr
>WENV183594399
OODB01018735
398833
Bacillota
TGT
Thr
>WENV183593907
OODB01001592
285556
Bacillota
TGT
Thr
>WENV183593464
OODB01000097
175849
Bacillota
GTC
Asp
>WENV183593688
OODB01000510
175849
Bacillota
GTC
Asp
>WENV183593933
OODB01001861
175849
Bacillota
GTC
Asp
>WENV183594204
OODB01006985
175849
Bacillota
GTC
Asp
>WENV183593590
OODB01000262
56074
Bacillota
TGA
Ser
>WENV183593854
OODB01001181
56074
Bacillota
TGA
Ser
>WENV183594025
OODB01002900
56074
Bacillota
TGA
Ser
>WENV183594125
OODB01004705
56074
Bacillota
TGA
Ser
>WENV183594352
OODB01014556
56074
Bacillota
TGA
Ser
>WENV183593733
OODB01000649
280473
Bacillota
TGG
Pro
>WENV183593750
OODB01000722
280473
Bacillota
TGG
Pro
>WENV183594225
OODB01007747
280473
Bacillota
TGG
Pro
>WENV183594371
OODB01016076
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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