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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
126 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183595140
OODC01002228
58120
Bacillota
AAG
Leu
>WENV183595356
OODC01010657
179176
Bacillota
ACG
Arg
>WENV183595080
OODC01001420
175831
Bacillota
ACG
Arg
>WENV183595198
OODC01003144
175831
Bacillota
ACG
Arg
>WENV183595429
OODC01022222
175831
Bacillota
ACG
Arg
>WENV183595090
OODC01001544
175842
Bacillota
CAC
Val
>WENV183595116
OODC01001938
175842
Bacillota
CAC
Val
>WENV183595269
OODC01005400
175842
Bacillota
CAC
Val
>WENV183595194
OODC01003066
73664
Bacillota
CAG
Leu
>WENV183595028
OODC01001083
73009
Bacillota
CAG
Leu
>WENV183595104
OODC01001833
73009
Bacillota
CAG
Leu
>WENV183595211
OODC01003510
73009
Bacillota
CAG
Leu
>WENV183595486
OODC01039749
73009
Bacillota
CAG
Leu
>WENV183594691
OODC01000083
187364
Bacillota
CAT
Met
>WENV183594731
OODC01000125
497729
Bacillota
CCA
Trp
>WENV183595132
OODC01002178
497729
Bacillota
CCA
Trp
>WENV183595423
OODC01021409
497729
Bacillota
CCA
Trp
>WENV183594854
OODC01000351
291576
Bacillota
CCC
Gly
>WENV183595063
OODC01001260
291576
Bacillota
CCC
Gly
>WENV183595247
OODC01004575
291576
Bacillota
CCC
Gly
>WENV183594607
OODC01000008
483485
Bacillota
CCC
Gly
>WENV183595042
OODC01001118
179755
Bacillota
CCG
Arg
>WENV183595233
OODC01004017
179755
Bacillota
CCG
Arg
>WENV183595256
OODC01004872
179755
Bacillota
CCG
Arg
>WENV183595358
OODC01010809
179755
Bacillota
CCG
Arg
>WENV183594998
OODC01000973
291581
Bacillota
CGG
Pro
>WENV183595018
OODC01001018
291581
Bacillota
CGG
Pro
>WENV183595217
OODC01003625
291581
Bacillota
CGG
Pro
>WENV183595149
OODC01002343
398854
Bacillota
CTC
Glu
>WENV183595405
OODC01017193
398854
Bacillota
CTC
Glu
>WENV183595253
OODC01004687
398854
Bacillota
CTC
Glu
>WENV183595315
OODC01007702
398854
Bacillota
CTC
Glu
>WENV183595387
OODC01014052
398854
Bacillota
CTC
Glu
>WENV183595399
OODC01015646
398854
Bacillota
CTC
Glu
>WENV183594806
OODC01000232
406186
Bacillota
CTC
Glu
>WENV183594807
OODC01000232
406186
Bacillota
CTC
Glu
>WENV183594808
OODC01000232
406186
Bacillota
CTC
Glu
>WENV183594809
OODC01000232
406186
Bacillota
CTC
Glu
>WENV183594820
OODC01000264
407726
Bacillota
CTG
Gln
>WENV183595159
OODC01002546
407726
Bacillota
CTG
Gln
>WENV183594863
OODC01000382
480322
Bacillota
CTG
Gln
>WENV183594997
OODC01000973
480322
Bacillota
CTG
Gln
>WENV183595017
OODC01001018
480322
Bacillota
CTG
Gln
>WENV183595021
OODC01001029
480322
Bacillota
CTG
Gln
>WENV183595118
OODC01001942
480322
Bacillota
CTG
Gln
>WENV183595216
OODC01003625
480322
Bacillota
CTG
Gln
>WENV183595400
OODC01015646
322848
Bacillota
CTT
Lys
>WENV183595411
OODC01018120
322848
Bacillota
CTT
Lys
>WENV183594958
OODC01000756
280428
Bacillota
GAA
Phe
>WENV183595472
OODC01032536
280428
Bacillota
GAA
Phe
>WENV183594767
OODC01000167
291579
Bacillota
GAA
Phe
>WENV183595334
OODC01009291
291579
Bacillota
GAA
Phe
>WENV183594799
OODC01000214
284627
Bacillota
GAA
Phe
>WENV183595056
OODC01001208
284627
Bacillota
GAA
Phe
>WENV183594910
OODC01000568
280483
Bacillota
GAA
Phe
>WENV183595106
OODC01001838
280447
Bacillota
GAC
Val
>WENV183595157
OODC01002519
280447
Bacillota
GAC
Val
>WENV183595245
OODC01004458
280447
Bacillota
GAC
Val
>WENV183595338
OODC01009639
280447
Bacillota
GAC
Val
>WENV183595476
OODC01037122
280447
Bacillota
GAC
Val
>WENV183595415
OODC01020932
405363
Bacillota
GCA
Cys
>WENV183595172
OODC01002667
398835
Bacillota
GCC
Gly
>WENV183595445
OODC01025813
398835
Bacillota
GCC
Gly
>WENV183595153
OODC01002361
5692
Bacillota
GCT
Ser
>WENV183595220
OODC01003642
5692
Bacillota
GCT
Ser
>WENV183595327
OODC01008748
184497
Bacillota
GGG
Pro
>WENV183595043
OODC01001123
280444
Bacillota
GGT
Thr
>WENV183595094
OODC01001632
280444
Bacillota
GGT
Thr
>WENV183595097
OODC01001632
280444
Bacillota
GGT
Thr
>WENV183595209
OODC01003423
280444
Bacillota
GGT
Thr
>WENV183595264
OODC01005166
280444
Bacillota
GGT
Thr
>WENV183595278
OODC01005613
280444
Bacillota
GGT
Thr
>WENV183595329
OODC01008926
280444
Bacillota
GGT
Thr
>WENV183595337
OODC01009369
280444
Bacillota
GGT
Thr
>WENV183595357
OODC01010658
99852
Bacillota
GTA
Tyr
>WENV183594608
OODC01000010
118669
Bacillota
GTA
Tyr
>WENV183594797
OODC01000214
118669
Bacillota
GTA
Tyr
>WENV183595431
OODC01022926
118669
Bacillota
GTA
Tyr
>WENV183595012
OODC01001013
180688
Bacillota
GTC
Asp
>WENV183595096
OODC01001632
175849
Bacillota
GTC
Asp
>WENV183595208
OODC01003423
175849
Bacillota
GTC
Asp
>WENV183595277
OODC01005613
175849
Bacillota
GTC
Asp
>WENV183595336
OODC01009369
175849
Bacillota
GTC
Asp
>WENV183595173
OODC01002714
175857
Bacillota
GTG
His
>WENV183595446
OODC01027801
175857
Bacillota
GTG
His
>WENV183595150
OODC01002343
175868
Bacillota
GTT
Asn
>WENV183595254
OODC01004687
175868
Bacillota
GTT
Asn
>WENV183595316
OODC01007702
175868
Bacillota
GTT
Asn
>WENV183595388
OODC01014052
175868
Bacillota
GTT
Asn
>WENV183595406
OODC01017193
175868
Bacillota
GTT
Asn
>WENV183595160
OODC01002556
298260
Bacillota
GTT
Asn
>WENV183595468
OODC01032476
298260
Bacillota
GTT
Asn
>WENV183594609
OODC01000010
82124
Bacillota
TAA
Leu
>WENV183595045
OODC01001141
46835
Bacillota
TAA
Leu
>WENV183595210
OODC01003478
46835
Bacillota
TAA
Leu
>WENV183594934
OODC01000630
290391
Bacillota
TAC
Val
>WENV183595013
OODC01001013
290391
Bacillota
TAC
Val
>WENV183595062
OODC01001250
280466
Bacillota
TAC
Val
>WENV183594690
OODC01000083
294020
Bacillota
TAC
Val
>WENV183595039
OODC01001115
321248
Bacillota
TAC
Val
>WENV183595360
OODC01010922
321248
Bacillota
TAC
Val
>WENV183595453
OODC01028401
317820
Bacillota
TAC
Val
>WENV183594765
OODC01000167
484885
Bacillota
TCC
Gly
>WENV183594886
OODC01000486
484885
Bacillota
TCC
Gly
>WENV183595005
OODC01001001
484885
Bacillota
TCC
Gly
>WENV183595484
OODC01039749
175859
Bacillota
TCT
Arg
>WENV183595342
OODC01009946
179166
Bacillota
TCT
Arg
>WENV183595152
OODC01002361
56074
Bacillota
TGA
Ser
>WENV183595219
OODC01003642
56074
Bacillota
TGA
Ser
>WENV183595367
OODC01011759
280486
Bacillota
TGC
Ala
>WENV183595115
OODC01001937
280473
Bacillota
TGG
Pro
>WENV183595349
OODC01010175
280473
Bacillota
TGG
Pro
>WENV183595365
OODC01011438
280473
Bacillota
TGG
Pro
>WENV183594982
OODC01000910
398833
Bacillota
TGT
Thr
>WENV183595144
OODC01002317
398833
Bacillota
TGT
Thr
>WENV183595313
OODC01007361
398833
Bacillota
TGT
Thr
>WENV183595010
OODC01001013
285556
Bacillota
TGT
Thr
>WENV183594969
OODC01000833
399153
Bacillota
TTC
Glu
>WENV183595409
OODC01018076
398857
Bacillota
TTC
Glu
>WENV183595074
OODC01001395
398832
Bacillota
TTC
Glu
>WENV183595447
OODC01027801
401685
Bacillota
TTG
Gln
>WENV183595016
OODC01001018
480324
Bacillota
TTG
Gln
>WENV183595027
OODC01001070
480324
Bacillota
TTG
Gln
>WENV183595055
OODC01001205
480324
Bacillota
TTG
Gln
>WENV183595339
OODC01009683
480324
Bacillota
TTG
Gln
>WENV183595345
OODC01009946
280476
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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