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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
111 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183595969
OODD01003239
377363
Bacillota
GAA
Phe
>WENV183595935
OODD01002522
343590
Bacillota
GCC
Gly
>WENV183596072
OODD01012228
343590
Bacillota
GCC
Gly
>WENV183595917
OODD01002172
349107
Bacillota
GCC
Gly
>WENV183595946
OODD01002619
349107
Bacillota
GCC
Gly
>WENV183595984
OODD01003747
349107
Bacillota
GCC
Gly
>WENV183596152
OODD01028068
349107
Bacillota
GCC
Gly
>WENV183595544
OODD01000033
281077
Bacillota
GTT
Asn
>WENV183596096
OODD01017242
444314
Bacillota
GTT
Asn
>WENV183595916
OODD01002172
280428
Bacillota
GAA
Phe
>WENV183595945
OODD01002619
280428
Bacillota
GAA
Phe
>WENV183595562
OODD01000048
179917
Bacillota
CAT
Met
>WENV183596153
OODD01028068
280466
Bacillota
TAC
Val
>WENV183595627
OODD01000158
284746
Bacillota
CTG
Gln
>WENV183595735
OODD01000424
280492
Bacillota
CTT
Lys
>WENV183595751
OODD01000589
175842
Bacillota
CAC
Val
>WENV183595915
OODD01002151
175842
Bacillota
CAC
Val
>WENV183595532
OODD01000022
184497
Bacillota
GGG
Pro
>WENV183596080
OODD01013625
215243
Bacillota
CAT
Met
>WENV183595724
OODD01000373
190476
Bacillota
CAT
Met
>WENV183595809
OODD01000863
190476
Bacillota
CAT
Met
>WENV183595798
OODD01000770
280447
Bacillota
GAC
Val
>WENV183595825
OODD01001025
280447
Bacillota
GAC
Val
>WENV183595862
OODD01001428
280447
Bacillota
GAC
Val
>WENV183595970
OODD01003467
280447
Bacillota
GAC
Val
>WENV183596078
OODD01013385
280447
Bacillota
GAC
Val
>WENV183595913
OODD01002083
5692
Bacillota
GCT
Ser
>WENV183596151
OODD01027400
312274
Bacillota
GGC
Ala
>WENV183595654
OODD01000198
359682
Bacillota
TAC
Val
>WENV183595872
OODD01001502
359682
Bacillota
TAC
Val
>WENV183595958
OODD01002836
284723
Bacillota
TAC
Val
>WENV183595710
OODD01000303
73009
Bacillota
CAG
Leu
>WENV183595829
OODD01001126
73009
Bacillota
CAG
Leu
>WENV183595879
OODD01001619
73009
Bacillota
CAG
Leu
>WENV183596002
OODD01005131
73009
Bacillota
CAG
Leu
>WENV183596097
OODD01017242
399266
Bacillota
>WENV183595823
OODD01000977
291581
Bacillota
CGG
Pro
>WENV183595954
OODD01002799
291581
Bacillota
CGG
Pro
>WENV183595868
OODD01001487
175859
Bacillota
TCT
Arg
>WENV183596024
OODD01006776
398835
Bacillota
GCC
Gly
>WENV183595914
OODD01002123
175831
Bacillota
ACG
Arg
>WENV183595851
OODD01001264
179810
Bacillota
TCT
Arg
>WENV183596030
OODD01006835
346451
Bacillota
TTT
Lys
>WENV183595671
OODD01000226
480322
Bacillota
CTG
Gln
>WENV183595822
OODD01000977
480322
Bacillota
CTG
Gln
>WENV183595928
OODD01002367
480322
Bacillota
CTG
Gln
>WENV183595953
OODD01002799
480322
Bacillota
CTG
Gln
>WENV183595959
OODD01002836
187364
Bacillota
CAT
Met
>WENV183595691
OODD01000270
401685
Bacillota
TTG
Gln
>WENV183595777
OODD01000633
175868
Bacillota
GTT
Asn
>WENV183595910
OODD01002054
175868
Bacillota
GTT
Asn
>WENV183595649
OODD01000198
284744
Bacillota
TTT
Lys
>WENV183595870
OODD01001502
284744
Bacillota
TTT
Lys
>WENV183596006
OODD01005251
120584
Bacillota
GTA
Tyr
>WENV183595750
OODD01000575
398854
Bacillota
CTC
Glu
>WENV183595909
OODD01002054
398854
Bacillota
CTC
Glu
>WENV183595629
OODD01000165
291576
Bacillota
CCC
Gly
>WENV183595865
OODD01001446
480324
Bacillota
TTG
Gln
>WENV183595700
OODD01000277
497729
Bacillota
CCA
Trp
>WENV183596003
OODD01005145
497729
Bacillota
CCA
Trp
>WENV183595941
OODD01002575
56079
Bacillota
AAG
Leu
>WENV183596093
OODD01016663
292374
Bacillota
TGC
Ala
>WENV183595587
OODD01000071
179935
Bacillota
GTC
Asp
>WENV183595652
OODD01000198
179935
Bacillota
GTC
Asp
>WENV183595613
OODD01000134
398857
Bacillota
TTC
Glu
>WENV183595673
OODD01000232
117745
Bacillota
GTA
Tyr
>WENV183595752
OODD01000596
280444
Bacillota
GGT
Thr
>WENV183595948
OODD01002653
280444
Bacillota
GGT
Thr
>WENV183595951
OODD01002653
280444
Bacillota
GGT
Thr
>WENV183595991
OODD01004035
280444
Bacillota
GGT
Thr
>WENV183596076
OODD01012495
354380
Bacillota
TTT
Lys
>WENV183596104
OODD01020296
354380
Bacillota
TTT
Lys
>WENV183596165
OODD01032238
46643
Bacillota
TGA
Ser
>WENV183595888
OODD01001743
179755
Bacillota
CCG
Arg
>WENV183596048
OODD01008197
179755
Bacillota
CCG
Arg
>WENV183595594
OODD01000071
401111
Bacillota
TTC
Glu
>WENV183595650
OODD01000198
401111
Bacillota
TTC
Glu
>WENV183595871
OODD01001502
401111
Bacillota
TTC
Glu
>WENV183595701
OODD01000280
46835
Bacillota
TAA
Leu
>WENV183595588
OODD01000071
284742
Bacillota
GAA
Phe
>WENV183595653
OODD01000198
284742
Bacillota
GAA
Phe
>WENV183595725
OODD01000373
398832
Bacillota
TTC
Glu
>WENV183595810
OODD01000863
398832
Bacillota
TTC
Glu
>WENV183596075
OODD01012495
203851
Bacillota
TCT
Arg
>WENV183596073
OODD01012495
449573
Bacillota
>WENV183595714
OODD01000336
118669
Bacillota
GTA
Tyr
>WENV183596035
OODD01007728
24146
Bacillota
GCT
Ser
>WENV183595697
OODD01000275
52748
Bacillota
TGA
Ser
>WENV183595920
OODD01002195
282755
Bacillota
GGT
Thr
>WENV183596150
OODD01026939
280476
Bacillota
TTT
Lys
>WENV183595893
OODD01001876
280462
Bacillota
GAA
Phe
>WENV183595605
OODD01000106
398852
Bacillota
CTC
Glu
>WENV183595674
OODD01000232
398852
Bacillota
CTC
Glu
>WENV183595762
OODD01000599
398852
Bacillota
CTC
Glu
>WENV183595799
OODD01000785
398852
Bacillota
CTC
Glu
>WENV183595881
OODD01001647
398852
Bacillota
CTC
Glu
>WENV183595882
OODD01001647
398852
Bacillota
CTC
Glu
>WENV183596005
OODD01005251
399260
Bacillota
TGT
Thr
>WENV183596092
OODD01016663
201856
Bacillota
GAT
Ile
>WENV183595690
OODD01000270
175857
Bacillota
GTG
His
>WENV183595841
OODD01001238
175857
Bacillota
GTG
His
>WENV183595826
OODD01001036
398833
Bacillota
TGT
Thr
>WENV183595873
OODD01001511
398833
Bacillota
TGT
Thr
>WENV183595950
OODD01002653
175849
Bacillota
GTC
Asp
>WENV183595990
OODD01004035
175849
Bacillota
GTC
Asp
>WENV183595843
OODD01001238
280463
Bacillota
TTT
Lys
>WENV183596053
OODD01009003
280486
Bacillota
TGC
Ala
>WENV183595912
OODD01002083
56074
Bacillota
TGA
Ser
>WENV183595828
OODD01001090
280473
Bacillota
TGG
Pro
>WENV183596004
OODD01005224
280473
Bacillota
TGG
Pro
>WENV183596162
OODD01030483
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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