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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183599103
OODG01027076
280500
Bacillota
TGC
Ala
>WENV183598500
OODG01001529
405363
Bacillota
GCA
Cys
>WENV183598737
OODG01005124
280428
Bacillota
GAA
Phe
>WENV183598080
OODG01000014
184114
Bacillota
GTG
His
>WENV183598584
OODG01002511
175842
Bacillota
CAC
Val
>WENV183598245
OODG01000417
291629
Bacillota
CCA
Trp
>WENV183599083
OODG01022194
179563
Bacillota
GAT
Ile
>WENV183599082
OODG01022194
295166
Bacillota
TGC
Ala
>WENV183598690
OODG01004143
190476
Bacillota
CAT
Met
>WENV183598609
OODG01002896
280447
Bacillota
GAC
Val
>WENV183598753
OODG01005339
280447
Bacillota
GAC
Val
>WENV183598836
OODG01006798
5692
Bacillota
GCT
Ser
>WENV183598485
OODG01001482
312274
Bacillota
GGC
Ala
>WENV183598287
OODG01000552
186123
Bacillota
GTC
Asp
>WENV183598877
OODG01008021
73009
Bacillota
CAG
Leu
>WENV183598490
OODG01001495
291581
Bacillota
CGG
Pro
>WENV183598812
OODG01006035
175859
Bacillota
TCT
Arg
>WENV183598796
OODG01005707
175831
Bacillota
ACG
Arg
>WENV183598288
OODG01000552
291634
Bacillota
GAA
Phe
>WENV183598489
OODG01001495
480322
Bacillota
CTG
Gln
>WENV183598667
OODG01003782
480322
Bacillota
CTG
Gln
>WENV183598814
OODG01006152
322848
Bacillota
CTT
Lys
>WENV183598813
OODG01006152
398854
Bacillota
CTC
Glu
>WENV183598608
OODG01002867
291576
Bacillota
CCC
Gly
>WENV183598434
OODG01001168
480324
Bacillota
TTG
Gln
>WENV183598283
OODG01000535
303718
Bacillota
TGT
Thr
>WENV183598339
OODG01000759
303718
Bacillota
TGT
Thr
>WENV183598646
OODG01003435
303718
Bacillota
TGT
Thr
>WENV183599057
OODG01018619
186051
Bacillota
GAT
Ile
>WENV183598811
OODG01006014
280444
Bacillota
GGT
Thr
>WENV183598885
OODG01008223
317482
Bacillota
TAC
Val
>WENV183598499
OODG01001529
321753
Bacillota
GCC
Gly
>WENV183599144
OODG01037877
15649
Bacillota
GGA
Ser
>WENV183598686
OODG01004086
179755
Bacillota
CCG
Arg
>WENV183598691
OODG01004143
398832
Bacillota
TTC
Glu
>WENV183598057
OODG01000002
289123
Bacillota
GGT
Thr
>WENV183598802
OODG01005843
398833
Bacillota
TGT
Thr
>WENV183598256
OODG01000448
405393
Bacillota
GCC
Gly
>WENV183598835
OODG01006798
56074
Bacillota
TGA
Ser
>WENV183598520
OODG01001698
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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