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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
98 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183606720
OODO01000022
418726
Bacillota
TGT
Thr
>WENV183606722
OODO01000022
141454
Bacillota
TAG
Leu
>WENV183606723
OODO01000022
398916
Bacillota
>WENV183606724
OODO01000022
176014
Bacillota
TCT
Arg
>WENV183606725
OODO01000022
280642
Bacillota
TTG
Gln
>WENV183606726
OODO01000022
280639
Bacillota
TTT
Lys
>WENV183606728
OODO01000022
285756
Bacillota
GCC
Gly
>WENV183606760
OODO01000055
290325
Bacillota
GCC
Gly
>WENV183606822
OODO01000153
348419
Bacillota
GTT
Asn
>WENV183606823
OODO01000153
398857
Bacillota
TTC
Glu
>WENV183606835
OODO01000173
280492
Bacillota
CTT
Lys
>WENV183606842
OODO01000187
280462
Bacillota
GAA
Phe
>WENV183606860
OODO01000224
46643
Bacillota
TGA
Ser
>WENV183606887
OODO01000270
322848
Bacillota
CTT
Lys
>WENV183606914
OODO01000353
175859
Bacillota
TCT
Arg
>WENV183606936
OODO01000418
398852
Bacillota
CTC
Glu
>WENV183606957
OODO01000516
497729
Bacillota
CCA
Trp
>WENV183606963
OODO01000542
117745
Bacillota
GTA
Tyr
>WENV183606964
OODO01000542
398852
Bacillota
CTC
Glu
>WENV183606975
OODO01000579
480322
Bacillota
CTG
Gln
>WENV183606981
OODO01000602
480324
Bacillota
TTG
Gln
>WENV183607008
OODO01000739
56074
Bacillota
TGA
Ser
>WENV183607009
OODO01000739
5692
Bacillota
GCT
Ser
>WENV183607026
OODO01000777
398852
Bacillota
CTC
Glu
>WENV183607030
OODO01000809
480322
Bacillota
CTG
Gln
>WENV183607031
OODO01000809
291581
Bacillota
CGG
Pro
>WENV183607032
OODO01000811
284627
Bacillota
GAA
Phe
>WENV183607044
OODO01000887
175859
Bacillota
TCT
Arg
>WENV183607048
OODO01000914
280447
Bacillota
GAC
Val
>WENV183607052
OODO01000932
280473
Bacillota
TGG
Pro
>WENV183607069
OODO01000947
175859
Bacillota
TCT
Arg
>WENV183607081
OODO01001033
179755
Bacillota
CCG
Arg
>WENV183607117
OODO01001236
480322
Bacillota
CTG
Gln
>WENV183607127
OODO01001271
118669
Bacillota
GTA
Tyr
>WENV183607133
OODO01001327
56074
Bacillota
TGA
Ser
>WENV183607134
OODO01001327
5692
Bacillota
GCT
Ser
>WENV183607135
OODO01001327
280447
Bacillota
GAC
Val
>WENV183607137
OODO01001341
280428
Bacillota
GAA
Phe
>WENV183607143
OODO01001389
398852
Bacillota
CTC
Glu
>WENV183607149
OODO01001448
280473
Bacillota
TGG
Pro
>WENV183607156
OODO01001590
291576
Bacillota
CCC
Gly
>WENV183607174
OODO01001762
480324
Bacillota
TTG
Gln
>WENV183607201
OODO01002103
343590
Bacillota
GCC
Gly
>WENV183607202
OODO01002103
343590
Bacillota
GCC
Gly
>WENV183607205
OODO01002110
179810
Bacillota
TCT
Arg
>WENV183607206
OODO01002110
175857
Bacillota
GTG
His
>WENV183607218
OODO01002198
398833
Bacillota
TGT
Thr
>WENV183607220
OODO01002203
175849
Bacillota
GTC
Asp
>WENV183607221
OODO01002203
280444
Bacillota
GGT
Thr
>WENV183607222
OODO01002203
280444
Bacillota
GGT
Thr
>WENV183607224
OODO01002235
175868
Bacillota
GTT
Asn
>WENV183607228
OODO01002271
175859
Bacillota
TCT
Arg
>WENV183607233
OODO01002355
480324
Bacillota
TTG
Gln
>WENV183607239
OODO01002484
280473
Bacillota
TGG
Pro
>WENV183607276
OODO01003058
398833
Bacillota
TGT
Thr
>WENV183607279
OODO01003097
175842
Bacillota
CAC
Val
>WENV183607297
OODO01003458
328987
Bacillota
TGG
Pro
>WENV183607298
OODO01003458
480520
Bacillota
TCC
Gly
>WENV183607300
OODO01003458
330433
Bacillota
GTG
His
>WENV183607302
OODO01003458
354380
Bacillota
TTT
Lys
>WENV183607305
OODO01003520
291576
Bacillota
CCC
Gly
>WENV183607308
OODO01003548
190476
Bacillota
CAT
Met
>WENV183607309
OODO01003548
398832
Bacillota
TTC
Glu
>WENV183607321
OODO01003850
302145
Bacillota
GAA
Phe
>WENV183607323
OODO01003986
175868
Bacillota
GTT
Asn
>WENV183607325
OODO01003996
179755
Bacillota
CCG
Arg
>WENV183607327
OODO01004095
175868
Bacillota
GTT
Asn
>WENV183607329
OODO01004154
175859
Bacillota
TCT
Arg
>WENV183607334
OODO01004201
291576
Bacillota
CCC
Gly
>WENV183607336
OODO01004241
398832
Bacillota
TTC
Glu
>WENV183607347
OODO01004475
175831
Bacillota
ACG
Arg
>WENV183607348
OODO01004507
179755
Bacillota
CCG
Arg
>WENV183607350
OODO01004526
398854
Bacillota
CTC
Glu
>WENV183607351
OODO01004526
175868
Bacillota
GTT
Asn
>WENV183607352
OODO01004530
398833
Bacillota
TGT
Thr
>WENV183607353
OODO01004566
56079
Bacillota
AAG
Leu
>WENV183607354
OODO01004566
73664
Bacillota
CAG
Leu
>WENV183607380
OODO01005337
398852
Bacillota
CTC
Glu
>WENV183607388
OODO01005731
480322
Bacillota
CTG
Gln
>WENV183607392
OODO01005889
280646
Bacillota
TGC
Ala
>WENV183607402
OODO01006185
398854
Bacillota
CTC
Glu
>WENV183607403
OODO01006185
175868
Bacillota
GTT
Asn
>WENV183607445
OODO01007630
141533
Bacillota
CAA
Leu
>WENV183607463
OODO01008393
73009
Bacillota
CAG
Leu
>WENV183607553
OODO01013706
179755
Bacillota
CCG
Arg
>WENV183607565
OODO01015191
195824
Bacillota
GAT
Ile
>WENV183607569
OODO01015580
99852
Bacillota
GTA
Tyr
>WENV183607601
OODO01019221
303718
Bacillota
TGT
Thr
>WENV183607603
OODO01019257
189473
Bacillota
GAT
Ile
>WENV183607626
OODO01023010
280500
Bacillota
TGC
Ala
>WENV183607640
OODO01024389
295166
Bacillota
TGC
Ala
>WENV183607668
OODO01030499
203851
Bacillota
TCT
Arg
>WENV183607694
OODO01035984
444314
Bacillota
GTT
Asn
>WENV183607703
OODO01037632
212982
Bacillota
ACG
Arg
>WENV183607704
OODO01037632
208754
Bacillota
TGG
Pro
>WENV183607708
OODO01037632
281417
Bacillota
GTC
Asp
>WENV183607731
OODO01047874
186051
Bacillota
GAT
Ile
>WENV183607772
OODO01060826
441615
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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