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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
108 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183632231
OOIF01001832
443965
Bacillota
>WENV183632306
OOIF01002420
73638
Bacillota
AAG
Leu
>WENV183632607
OOIF01007798
58120
Bacillota
AAG
Leu
>WENV183632775
OOIF01017740
179176
Bacillota
ACG
Arg
>WENV183632521
OOIF01005143
175842
Bacillota
CAC
Val
>WENV183632610
OOIF01008020
175842
Bacillota
CAC
Val
>WENV183632294
OOIF01002275
73009
Bacillota
CAG
Leu
>WENV183632295
OOIF01002290
73009
Bacillota
CAG
Leu
>WENV183631722
OOIF01000142
179917
Bacillota
CAT
Met
>WENV183632093
OOIF01001045
291629
Bacillota
CCA
Trp
>WENV183631699
OOIF01000115
497729
Bacillota
CCA
Trp
>WENV183632347
OOIF01002764
497729
Bacillota
CCA
Trp
>WENV183632264
OOIF01002038
291576
Bacillota
CCC
Gly
>WENV183632293
OOIF01002249
291576
Bacillota
CCC
Gly
>WENV183632769
OOIF01016666
483485
Bacillota
CCC
Gly
>WENV183632483
OOIF01004349
179755
Bacillota
CCG
Arg
>WENV183632518
OOIF01005088
179755
Bacillota
CCG
Arg
>WENV183632569
OOIF01006632
179755
Bacillota
CCG
Arg
>WENV183632627
OOIF01008448
179755
Bacillota
CCG
Arg
>WENV183632663
OOIF01010397
179755
Bacillota
CCG
Arg
>WENV183632269
OOIF01002041
291581
Bacillota
CGG
Pro
>WENV183632481
OOIF01004311
291581
Bacillota
CGG
Pro
>WENV183632515
OOIF01005054
291581
Bacillota
CGG
Pro
>WENV183632342
OOIF01002739
398854
Bacillota
CTC
Glu
>WENV183632544
OOIF01005655
398854
Bacillota
CTC
Glu
>WENV183632713
OOIF01012224
398854
Bacillota
CTC
Glu
>WENV183632568
OOIF01006604
407726
Bacillota
CTG
Gln
>WENV183631783
OOIF01000204
480322
Bacillota
CTG
Gln
>WENV183632131
OOIF01001205
480322
Bacillota
CTG
Gln
>WENV183632268
OOIF01002041
480322
Bacillota
CTG
Gln
>WENV183632285
OOIF01002176
480322
Bacillota
CTG
Gln
>WENV183632335
OOIF01002690
480322
Bacillota
CTG
Gln
>WENV183632480
OOIF01004311
480322
Bacillota
CTG
Gln
>WENV183632514
OOIF01005054
480322
Bacillota
CTG
Gln
>WENV183632562
OOIF01006359
480322
Bacillota
CTG
Gln
>WENV183632696
OOIF01011606
291579
Bacillota
GAA
Phe
>WENV183631631
OOIF01000057
284627
Bacillota
GAA
Phe
>WENV183632047
OOIF01000851
291634
Bacillota
GAA
Phe
>WENV183632277
OOIF01002112
280447
Bacillota
GAC
Val
>WENV183632578
OOIF01006972
280447
Bacillota
GAC
Val
>WENV183632670
OOIF01010533
280447
Bacillota
GAC
Val
>WENV183632723
OOIF01013140
280447
Bacillota
GAC
Val
>WENV183632740
OOIF01013975
280447
Bacillota
GAC
Val
>WENV183632129
OOIF01001200
280447
Bacillota
GAC
Val
>WENV183632815
OOIF01021315
175916
Bacillota
GAT
Ile
>WENV183632711
OOIF01012186
186051
Bacillota
GAT
Ile
>WENV183632919
OOIF01038270
201856
Bacillota
GAT
Ile
>WENV183632203
OOIF01001603
405363
Bacillota
GCA
Cys
>WENV183632598
OOIF01007618
481217
Bacillota
GCA
Cys
>WENV183632097
OOIF01001058
343590
Bacillota
GCC
Gly
>WENV183631933
OOIF01000486
285756
Bacillota
GCC
Gly
>WENV183631554
OOIF01000010
405393
Bacillota
GCC
Gly
>WENV183631955
OOIF01000525
5692
Bacillota
GCT
Ser
>WENV183632375
OOIF01003013
5692
Bacillota
GCT
Ser
>WENV183632384
OOIF01003056
5692
Bacillota
GCT
Ser
>WENV183632531
OOIF01005424
5692
Bacillota
GCT
Ser
>WENV183632561
OOIF01006304
5692
Bacillota
GCT
Ser
>WENV183632116
OOIF01001136
27216
Bacillota
GCT
Ser
>WENV183632513
OOIF01005047
312274
Bacillota
GGC
Ala
>WENV183632172
OOIF01001399
280444
Bacillota
GGT
Thr
>WENV183632260
OOIF01001961
280444
Bacillota
GGT
Thr
>WENV183631690
OOIF01000108
289123
Bacillota
GGT
Thr
>WENV183632339
OOIF01002710
99852
Bacillota
GTA
Tyr
>WENV183632416
OOIF01003294
99852
Bacillota
GTA
Tyr
>WENV183632509
OOIF01004938
99852
Bacillota
GTA
Tyr
>WENV183632583
OOIF01007361
99852
Bacillota
GTA
Tyr
>WENV183632046
OOIF01000851
186123
Bacillota
GTC
Asp
>WENV183632537
OOIF01005509
175911
Bacillota
GTC
Asp
>WENV183632486
OOIF01004396
175915
Bacillota
GTC
Asp
>WENV183632937
OOIF01042550
175849
Bacillota
GTC
Asp
>WENV183631788
OOIF01000209
229015
Bacillota
GTG
His
>WENV183632149
OOIF01001305
175868
Bacillota
GTT
Asn
>WENV183632343
OOIF01002739
175868
Bacillota
GTT
Asn
>WENV183632545
OOIF01005655
175868
Bacillota
GTT
Asn
>WENV183632714
OOIF01012224
175868
Bacillota
GTT
Asn
>WENV183632916
OOIF01038223
298260
Bacillota
GTT
Asn
>WENV183632927
OOIF01041132
46835
Bacillota
TAA
Leu
>WENV183632233
OOIF01001832
298270
Bacillota
TAC
Val
>WENV183631930
OOIF01000486
280427
Bacillota
TAC
Val
>WENV183631719
OOIF01000142
284723
Bacillota
TAC
Val
>WENV183632166
OOIF01001363
284723
Bacillota
TAC
Val
>WENV183632402
OOIF01003216
284723
Bacillota
TAC
Val
>WENV183632232
OOIF01001832
480359
Bacillota
TCC
Gly
>WENV183632041
OOIF01000835
175859
Bacillota
TCT
Arg
>WENV183632326
OOIF01002605
175859
Bacillota
TCT
Arg
>WENV183631787
OOIF01000209
179810
Bacillota
TCT
Arg
>WENV183631954
OOIF01000525
56074
Bacillota
TGA
Ser
>WENV183632374
OOIF01003013
56074
Bacillota
TGA
Ser
>WENV183632383
OOIF01003056
56074
Bacillota
TGA
Ser
>WENV183632530
OOIF01005424
56074
Bacillota
TGA
Ser
>WENV183632560
OOIF01006304
56074
Bacillota
TGA
Ser
>WENV183632816
OOIF01021315
280500
Bacillota
TGC
Ala
>WENV183632829
OOIF01022773
353153
Bacillota
TGC
Ala
>WENV183632944
OOIF01044056
314834
Bacillota
TGC
Ala
>WENV183632942
OOIF01043873
280486
Bacillota
TGC
Ala
>WENV183632323
OOIF01002571
280473
Bacillota
TGG
Pro
>WENV183632602
OOIF01007675
280473
Bacillota
TGG
Pro
>WENV183631687
OOIF01000108
332181
Bacillota
TGT
Thr
>WENV183632162
OOIF01001353
398833
Bacillota
TGT
Thr
>WENV183632336
OOIF01002695
398833
Bacillota
TGT
Thr
>WENV183631994
OOIF01000653
405357
Bacillota
TTC
Glu
>WENV183632589
OOIF01007568
398857
Bacillota
TTC
Glu
>WENV183632208
OOIF01001623
398832
Bacillota
TTC
Glu
>WENV183632380
OOIF01003035
398832
Bacillota
TTC
Glu
>WENV183632081
OOIF01001007
480324
Bacillota
TTG
Gln
>WENV183632156
OOIF01001340
480324
Bacillota
TTG
Gln
>WENV183631636
OOIF01000070
346451
Bacillota
TTT
Lys
>WENV183631834
OOIF01000261
346451
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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