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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
105 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183638488
OQVI01000034
480322
Bacillota
CTG
Gln
>WENV183638496
OQVI01000042
280476
Bacillota
TTT
Lys
>WENV183638498
OQVI01000045
280444
Bacillota
GGT
Thr
>WENV183638530
OQVI01000094
186123
Bacillota
GTC
Asp
>WENV183638531
OQVI01000094
291634
Bacillota
GAA
Phe
>WENV183638532
OQVI01000094
405393
Bacillota
GCC
Gly
>WENV183638574
OQVI01000124
480322
Bacillota
CTG
Gln
>WENV183638582
OQVI01000139
398852
Bacillota
CTC
Glu
>WENV183638583
OQVI01000139
398852
Bacillota
CTC
Glu
>WENV183638599
OQVI01000165
82124
Bacillota
TAA
Leu
>WENV183638598
OQVI01000165
118669
Bacillota
GTA
Tyr
>WENV183638628
OQVI01000230
291576
Bacillota
CCC
Gly
>WENV183638634
OQVI01000248
175842
Bacillota
CAC
Val
>WENV183638632
OQVI01000248
175859
Bacillota
TCT
Arg
>WENV183638677
OQVI01000318
289123
Bacillota
GGT
Thr
>WENV183638680
OQVI01000327
175831
Bacillota
ACG
Arg
>WENV183638695
OQVI01000369
284627
Bacillota
GAA
Phe
>WENV183638693
OQVI01000369
118669
Bacillota
GTA
Tyr
>WENV183638707
OQVI01000443
73664
Bacillota
CAG
Leu
>WENV183638708
OQVI01000448
480324
Bacillota
TTG
Gln
>WENV183638712
OQVI01000462
280447
Bacillota
GAC
Val
>WENV183638715
OQVI01000467
497729
Bacillota
CCA
Trp
>WENV183638725
OQVI01000493
291576
Bacillota
CCC
Gly
>WENV183638739
OQVI01000553
179755
Bacillota
CCG
Arg
>WENV183638741
OQVI01000569
291581
Bacillota
CGG
Pro
>WENV183638740
OQVI01000569
480322
Bacillota
CTG
Gln
>WENV183638742
OQVI01000569
480324
Bacillota
TTG
Gln
>WENV183638746
OQVI01000586
280447
Bacillota
GAC
Val
>WENV183638766
OQVI01000707
175842
Bacillota
CAC
Val
>WENV183638775
OQVI01000738
398833
Bacillota
TGT
Thr
>WENV183638794
OQVI01000821
184539
Bacillota
TCT
Arg
>WENV183638803
OQVI01000874
175859
Bacillota
TCT
Arg
>WENV183638816
OQVI01000949
175868
Bacillota
GTT
Asn
>WENV183638815
OQVI01000949
398854
Bacillota
CTC
Glu
>WENV183638842
OQVI01001079
73009
Bacillota
CAG
Leu
>WENV183638860
OQVI01001252
175831
Bacillota
ACG
Arg
>WENV183638880
OQVI01001347
280444
Bacillota
GGT
Thr
>WENV183638879
OQVI01001347
175849
Bacillota
GTC
Asp
>WENV183638877
OQVI01001347
280473
Bacillota
TGG
Pro
>WENV183638883
OQVI01001353
179755
Bacillota
CCG
Arg
>WENV183638888
OQVI01001440
73009
Bacillota
CAG
Leu
>WENV183638920
OQVI01001734
483485
Bacillota
CCC
Gly
>WENV183638927
OQVI01001795
46835
Bacillota
TAA
Leu
>WENV183638944
OQVI01002025
56074
Bacillota
TGA
Ser
>WENV183638968
OQVI01002185
290391
Bacillota
TAC
Val
>WENV183638969
OQVI01002185
285756
Bacillota
GCC
Gly
>WENV183638977
OQVI01002268
179176
Bacillota
ACG
Arg
>WENV183639008
OQVI01002590
280447
Bacillota
GAC
Val
>WENV183639012
OQVI01002600
186123
Bacillota
GTC
Asp
>WENV183639013
OQVI01002600
291634
Bacillota
GAA
Phe
>WENV183639022
OQVI01002667
99852
Bacillota
GTA
Tyr
>WENV183639070
OQVI01003515
280473
Bacillota
TGG
Pro
>WENV183639075
OQVI01003571
179176
Bacillota
ACG
Arg
>WENV183639079
OQVI01003640
58120
Bacillota
AAG
Leu
>WENV183639089
OQVI01003697
321248
Bacillota
TAC
Val
>WENV183639096
OQVI01003751
5692
Bacillota
GCT
Ser
>WENV183639095
OQVI01003751
56074
Bacillota
TGA
Ser
>WENV183639105
OQVI01003925
280447
Bacillota
GAC
Val
>WENV183639126
OQVI01004388
291629
Bacillota
CCA
Trp
>WENV183639134
OQVI01004465
175868
Bacillota
GTT
Asn
>WENV183639140
OQVI01004542
175859
Bacillota
TCT
Arg
>WENV183639143
OQVI01004568
190476
Bacillota
CAT
Met
>WENV183639144
OQVI01004568
398832
Bacillota
TTC
Glu
>WENV183639146
OQVI01004607
175868
Bacillota
GTT
Asn
>WENV183639145
OQVI01004607
398854
Bacillota
CTC
Glu
>WENV183639165
OQVI01004935
175868
Bacillota
GTT
Asn
>WENV183639164
OQVI01004935
398854
Bacillota
CTC
Glu
>WENV183639179
OQVI01005076
229015
Bacillota
GTG
His
>WENV183639178
OQVI01005076
179810
Bacillota
TCT
Arg
>WENV183639190
OQVI01005273
179755
Bacillota
CCG
Arg
>WENV183639193
OQVI01005285
405363
Bacillota
GCA
Cys
>WENV183639196
OQVI01005384
398833
Bacillota
TGT
Thr
>WENV183639198
OQVI01005424
179755
Bacillota
CCG
Arg
>WENV183639222
OQVI01005913
291581
Bacillota
CGG
Pro
>WENV183639221
OQVI01005913
480322
Bacillota
CTG
Gln
>WENV183639223
OQVI01005940
330413
Bacillota
CTT
Lys
>WENV183639250
OQVI01006546
280428
Bacillota
GAA
Phe
>WENV183639252
OQVI01006728
398857
Bacillota
TTC
Glu
>WENV183639256
OQVI01006771
291581
Bacillota
CGG
Pro
>WENV183639255
OQVI01006771
480322
Bacillota
CTG
Gln
>WENV183639290
OQVI01007877
291579
Bacillota
GAA
Phe
>WENV183639294
OQVI01008026
291579
Bacillota
GAA
Phe
>WENV183639318
OQVI01008836
184497
Bacillota
GGG
Pro
>WENV183639359
OQVI01010580
480322
Bacillota
CTG
Gln
>WENV183639374
OQVI01010993
321248
Bacillota
TAC
Val
>WENV183639382
OQVI01011148
187364
Bacillota
CAT
Met
>WENV183639385
OQVI01011286
175868
Bacillota
GTT
Asn
>WENV183639384
OQVI01011286
398854
Bacillota
CTC
Glu
>WENV183639402
OQVI01011938
405357
Bacillota
TTC
Glu
>WENV183639442
OQVI01013893
291576
Bacillota
CCC
Gly
>WENV183639461
OQVI01015368
481217
Bacillota
GCA
Cys
>WENV183639465
OQVI01015587
291581
Bacillota
CGG
Pro
>WENV183639464
OQVI01015587
480322
Bacillota
CTG
Gln
>WENV183639482
OQVI01015886
497729
Bacillota
CCA
Trp
>WENV183639486
OQVI01016245
56079
Bacillota
AAG
Leu
>WENV183639492
OQVI01016861
118669
Bacillota
GTA
Tyr
>WENV183639503
OQVI01018010
184504
Bacillota
GTC
Asp
>WENV183639543
OQVI01020432
406186
Bacillota
CTC
Glu
>WENV183639544
OQVI01020432
406186
Bacillota
CTC
Glu
>WENV183639545
OQVI01020432
406186
Bacillota
CTC
Glu
>WENV183639555
OQVI01021185
314834
Bacillota
TGC
Ala
>WENV183639579
OQVI01023181
179563
Bacillota
GAT
Ile
>WENV183639599
OQVI01024815
480322
Bacillota
CTG
Gln
>WENV183639655
OQVI01033425
127792
Bacillota
TAG
Leu
>WENV183639672
OQVI01035319
280646
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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