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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183653225
OQVZ01009081
99852
Bacillota
GTA
Tyr
>WENV183653288
OQVZ01012366
291579
Bacillota
GAA
Phe
>WENV183653197
OQVZ01007138
175842
Bacillota
CAC
Val
>WENV183653129
OQVZ01004191
407852
Bacillota
TTC
Glu
>WENV183653619
OQVZ01066014
179563
Bacillota
GAT
Ile
>WENV183653600
OQVZ01058346
179176
Bacillota
ACG
Arg
>WENV183652866
OQVZ01000405
190476
Bacillota
CAT
Met
>WENV183653420
OQVZ01023186
280447
Bacillota
GAC
Val
>WENV183653586
OQVZ01053501
5692
Bacillota
GCT
Ser
>WENV183652975
OQVZ01001330
186123
Bacillota
GTC
Asp
>WENV183652960
OQVZ01001185
73009
Bacillota
CAG
Leu
>WENV183653261
OQVZ01011049
291581
Bacillota
CGG
Pro
>WENV183653534
OQVZ01043635
280436
Bacillota
TGC
Ala
>WENV183653413
OQVZ01022311
175831
Bacillota
ACG
Arg
>WENV183653181
OQVZ01006725
187589
Bacillota
CAT
Met
>WENV183652976
OQVZ01001330
291634
Bacillota
GAA
Phe
>WENV183653507
OQVZ01038207
294020
Bacillota
TAC
Val
>WENV183653194
OQVZ01006986
484885
Bacillota
TCC
Gly
>WENV183653260
OQVZ01011049
480322
Bacillota
CTG
Gln
>WENV183653302
OQVZ01013169
401685
Bacillota
TTG
Gln
>WENV183653254
OQVZ01010622
175868
Bacillota
GTT
Asn
>WENV183653064
OQVZ01002539
398854
Bacillota
CTC
Glu
>WENV183653357
OQVZ01017096
291576
Bacillota
CCC
Gly
>WENV183653162
OQVZ01005628
480324
Bacillota
TTG
Gln
>WENV183653052
OQVZ01002230
303718
Bacillota
TGT
Thr
>WENV183653323
OQVZ01014602
56079
Bacillota
AAG
Leu
>WENV183653529
OQVZ01042808
186051
Bacillota
GAT
Ile
>WENV183652988
OQVZ01001472
204381
Bacillota
GAT
Ile
>WENV183653160
OQVZ01005602
204381
Bacillota
GAT
Ile
>WENV183653384
OQVZ01019131
280444
Bacillota
GGT
Thr
>WENV183653393
OQVZ01020180
280444
Bacillota
GGT
Thr
>WENV183653256
OQVZ01010793
291597
Bacillota
TGC
Ala
>WENV183652886
OQVZ01000622
289745
Bacillota
TTT
Lys
>WENV183653010
OQVZ01001606
281445
Bacillota
GTG
His
>WENV183653558
OQVZ01048517
179755
Bacillota
CCG
Arg
>WENV183653351
OQVZ01016523
46835
Bacillota
TAA
Leu
>WENV183652867
OQVZ01000405
398832
Bacillota
TTC
Glu
>WENV183653350
OQVZ01016523
175915
Bacillota
GTC
Asp
>WENV183653305
OQVZ01013219
309916
Bacillota
TTT
Lys
>WENV183652856
OQVZ01000349
289123
Bacillota
GGT
Thr
>WENV183653559
OQVZ01048625
280483
Bacillota
GAA
Phe
>WENV183653090
OQVZ01002974
298260
Bacillota
GTT
Asn
>WENV183652972
OQVZ01001295
285601
Bacillota
TTC
Glu
>WENV183653301
OQVZ01013169
175857
Bacillota
GTG
His
>WENV183653560
OQVZ01048625
285756
Bacillota
GCC
Gly
>WENV183653524
OQVZ01042018
184523
Bacillota
GAC
Val
>WENV183653136
OQVZ01004475
398833
Bacillota
TGT
Thr
>WENV183653383
OQVZ01019131
175849
Bacillota
GTC
Asp
>WENV183652951
OQVZ01001079
405393
Bacillota
GCC
Gly
>WENV183653151
OQVZ01005369
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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