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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV081777
BAAU01000424
140771
Bacteroidota
>WENV082126
BAAU01022529
73011
Bacteroidota
CAA
Leu
>WENV082090
BAAU01019984
74084
Bacteroidota
CAG
Leu
>WENV081828
BAAU01001097
280557
Bacteroidota
CAT
Met
>WENV082098
BAAU01020886
280557
Bacteroidota
CAT
Met
>WENV081755
BAAU01000145
201819
Bacteroidota
CAT
Met
>WENV081945
BAAU01005886
188555
Bacteroidota
CAT
Met
>WENV081749
BAAU01000088
398828
Bacteroidota
CCG
Arg
>WENV081775
BAAU01000420
398829
Bacteroidota
CCT
Arg
>WENV081821
BAAU01000885
351598
Bacteroidota
CGG
Pro
>WENV081847
BAAU01001689
351598
Bacteroidota
CGG
Pro
>WENV081792
BAAU01000457
280451
Bacteroidota
CGT
Thr
>WENV081742
BAAU01000007
488746
Bacteroidota
CTG
Gln
>WENV082032
BAAU01011314
488746
Bacteroidota
CTG
Gln
>WENV081798
BAAU01000532
398836
Bacteroidota
GCA
Cys
>WENV082013
BAAU01010168
398836
Bacteroidota
GCA
Cys
>WENV082154
BAAU01025910
398836
Bacteroidota
GCA
Cys
>WENV082089
BAAU01019984
280478
Bacteroidota
GCC
Gly
>WENV081750
BAAU01000093
20206
Bacteroidota
GGA
Ser
>WENV082135
BAAU01023290
20449
Bacteroidota
GGA
Ser
>WENV081797
BAAU01000500
27502
Bacteroidota
GGA
Ser
>WENV081796
BAAU01000499
175902
Bacteroidota
GGC
Ala
>WENV082007
BAAU01009371
175902
Bacteroidota
GGC
Ala
>WENV081850
BAAU01001777
170323
Bacteroidota
GGG
Pro
>WENV082080
BAAU01017073
170323
Bacteroidota
GGG
Pro
>WENV081772
BAAU01000387
99847
Bacteroidota
GTA
Tyr
>WENV081805
BAAU01000639
99847
Bacteroidota
GTA
Tyr
>WENV081947
BAAU01006015
203954
Bacteroidota
GTC
Asp
>WENV081948
BAAU01006015
203954
Bacteroidota
GTC
Asp
>WENV081865
BAAU01002387
175903
Bacteroidota
GTG
His
>WENV081762
BAAU01000192
175838
Bacteroidota
GTT
Asn
>WENV081763
BAAU01000192
175838
Bacteroidota
GTT
Asn
>WENV081761
BAAU01000178
117741
Bacteroidota
TAG
Leu
>WENV081771
BAAU01000375
117741
Bacteroidota
TAG
Leu
>WENV082044
BAAU01012349
178907
Bacteroidota
TCT
Arg
>WENV081842
BAAU01001581
56493
Bacteroidota
TGA
Ser
>WENV081740
BAAU01000004
69204
Bacteroidota
TGA
Ser
>WENV081774
BAAU01000411
484496
Bacteroidota
TTG
Gln
>WENV081897
BAAU01003363
280553
Bacteroidota
TTT
Lys
>WENV081756
BAAU01000164
280446
Bacteroidota
TTT
Lys
>WENV081912
BAAU01004041
280446
Bacteroidota
TTT
Lys
>WENV081869
BAAU01002597
365112
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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