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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
125 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170096564
CEAK01022732
172207
Bacteroidota
GGG
Pro
>WENV170096577
CEAK01022997
172207
Bacteroidota
GGG
Pro
>WENV170096667
CEAK01027977
172207
Bacteroidota
GGG
Pro
>WENV170096849
CEAK01035327
172207
Bacteroidota
GGG
Pro
>WENV170096221
CEAK01008990
117741
Bacteroidota
TAG
Leu
>WENV170096350
CEAK01014124
398829
Bacteroidota
CCT
Arg
>WENV170096643
CEAK01026456
398829
Bacteroidota
CCT
Arg
>WENV170096819
CEAK01034258
175838
Bacteroidota
GTT
Asn
>WENV170096820
CEAK01034258
175838
Bacteroidota
GTT
Asn
>WENV170096821
CEAK01034258
175838
Bacteroidota
GTT
Asn
>WENV170096527
CEAK01020683
404226
Bacteroidota
CCT
Arg
>WENV170096013
CEAK01000478
175904
Bacteroidota
CGG
Pro
>WENV170096088
CEAK01003223
175904
Bacteroidota
CGG
Pro
>WENV170096213
CEAK01008567
175904
Bacteroidota
CGG
Pro
>WENV170096116
CEAK01004586
289031
Bacteroidota
CAT
Met
>WENV170096818
CEAK01034109
289031
Bacteroidota
CAT
Met
>WENV170096071
CEAK01002270
280553
Bacteroidota
TTT
Lys
>WENV170096136
CEAK01005457
280553
Bacteroidota
TTT
Lys
>WENV170096813
CEAK01033998
280557
Bacteroidota
CAT
Met
>WENV170096562
CEAK01022439
20492
Bacteroidota
GGA
Ser
>WENV170096636
CEAK01026007
20492
Bacteroidota
GGA
Ser
>WENV170096765
CEAK01031656
20492
Bacteroidota
GGA
Ser
>WENV170096576
CEAK01022997
20206
Bacteroidota
GGA
Ser
>WENV170096670
CEAK01027977
20206
Bacteroidota
GGA
Ser
>WENV170096108
CEAK01004281
483416
Bacteroidota
CTG
Gln
>WENV170096528
CEAK01020683
398871
Bacteroidota
TTC
Glu
>WENV170096529
CEAK01020683
398871
Bacteroidota
TTC
Glu
>WENV170096355
CEAK01014440
201819
Bacteroidota
CAT
Met
>WENV170096356
CEAK01014440
201819
Bacteroidota
CAT
Met
>WENV170096137
CEAK01005460
118221
Bacteroidota
CAA
Leu
>WENV170096491
CEAK01019351
56493
Bacteroidota
TGA
Ser
>WENV170096746
CEAK01031317
56493
Bacteroidota
TGA
Ser
>WENV170096800
CEAK01033564
56493
Bacteroidota
TGA
Ser
>WENV170096709
CEAK01029081
175906
Bacteroidota
GTG
His
>WENV170096710
CEAK01029081
175906
Bacteroidota
GTG
His
>WENV170096544
CEAK01021204
175903
Bacteroidota
GTG
His
>WENV170096183
CEAK01007489
351598
Bacteroidota
CGG
Pro
>WENV170096419
CEAK01015760
351598
Bacteroidota
CGG
Pro
>WENV170096442
CEAK01016665
351598
Bacteroidota
CGG
Pro
>WENV170096569
CEAK01022750
351598
Bacteroidota
CGG
Pro
>WENV170096798
CEAK01033352
351598
Bacteroidota
CGG
Pro
>WENV170096748
CEAK01031322
118089
Bacteroidota
TAG
Leu
>WENV170096509
CEAK01019987
398872
Bacteroidota
GGT
Thr
>WENV170096089
CEAK01003223
280530
Bacteroidota
CCA
Trp
>WENV170096547
CEAK01021211
203954
Bacteroidota
GTC
Asp
>WENV170096654
CEAK01026990
178907
Bacteroidota
TCT
Arg
>WENV170096027
CEAK01001211
172085
Bacteroidota
TAC
Val
>WENV170096317
CEAK01012618
405877
Bacteroidota
GGT
Thr
>WENV170096583
CEAK01023171
56385
Bacteroidota
TGA
Ser
>WENV170096324
CEAK01012935
29791
Bacteroidota
GCT
Ser
>WENV170096255
CEAK01010225
20449
Bacteroidota
GGA
Ser
>WENV170096784
CEAK01032535
20449
Bacteroidota
GGA
Ser
>WENV170096272
CEAK01010564
242241
Bacteroidota
GTC
Asp
>WENV170096273
CEAK01010564
242241
Bacteroidota
GTC
Asp
>WENV170096769
CEAK01031916
21127
Bacteroidota
GGA
Ser
>WENV170096352
CEAK01014124
56072
Bacteroidota
TAA
Leu
>WENV170096363
CEAK01014451
175902
Bacteroidota
GGC
Ala
>WENV170096325
CEAK01012935
398860
Bacteroidota
CTC
Glu
>WENV170096246
CEAK01009902
480404
Bacteroidota
TTG
Gln
>WENV170096046
CEAK01002045
280451
Bacteroidota
CGT
Thr
>WENV170096017
CEAK01000595
99847
Bacteroidota
GTA
Tyr
>WENV170096025
CEAK01001199
99847
Bacteroidota
GTA
Tyr
>WENV170096823
CEAK01034258
99847
Bacteroidota
GTA
Tyr
>WENV170096079
CEAK01002619
399200
Bacteroidota
CAT
Met
>WENV170096086
CEAK01002837
399200
Bacteroidota
CAT
Met
>WENV170096481
CEAK01019170
399200
Bacteroidota
CAT
Met
>WENV170096731
CEAK01030490
399200
Bacteroidota
CAT
Met
>WENV170096240
CEAK01009856
404109
Bacteroidota
CTC
Glu
>WENV170096241
CEAK01009856
404109
Bacteroidota
CTC
Glu
>WENV170096332
CEAK01013450
186874
Bacteroidota
CAT
Met
>WENV170096686
CEAK01028251
46648
Bacteroidota
TAA
Leu
>WENV170096575
CEAK01022997
488746
Bacteroidota
CTG
Gln
>WENV170096669
CEAK01027977
488746
Bacteroidota
CTG
Gln
>WENV170096465
CEAK01017709
280478
Bacteroidota
GCC
Gly
>WENV170096593
CEAK01023676
280478
Bacteroidota
GCC
Gly
>WENV170096701
CEAK01028849
280478
Bacteroidota
GCC
Gly
>WENV170096703
CEAK01028849
280478
Bacteroidota
GCC
Gly
>WENV170096796
CEAK01033339
27524
Bacteroidota
GGA
Ser
>WENV170096059
CEAK01002050
175844
Bacteroidota
GGC
Ala
>WENV170096613
CEAK01024854
175844
Bacteroidota
GGC
Ala
>WENV170096586
CEAK01023422
73011
Bacteroidota
CAA
Leu
>WENV170096238
CEAK01009856
178134
Bacteroidota
TGG
Pro
>WENV170096358
CEAK01014440
398828
Bacteroidota
CCG
Arg
>WENV170096594
CEAK01023676
74084
Bacteroidota
CAG
Leu
>WENV170096785
CEAK01032535
74084
Bacteroidota
CAG
Leu
>WENV170096850
CEAK01035550
159415
Bacteroidota
TAC
Val
>WENV170096851
CEAK01035550
159415
Bacteroidota
TAC
Val
>WENV170096852
CEAK01035550
159415
Bacteroidota
TAC
Val
>WENV170096123
CEAK01004892
480325
Bacteroidota
CTG
Gln
>WENV170096124
CEAK01004892
480325
Bacteroidota
CTG
Gln
>WENV170096299
CEAK01011886
480325
Bacteroidota
CTG
Gln
>WENV170096300
CEAK01011886
480325
Bacteroidota
CTG
Gln
>WENV170096301
CEAK01011886
480325
Bacteroidota
CTG
Gln
>WENV170096380
CEAK01015026
140771
Bacteroidota
>WENV170096383
CEAK01015026
140771
Bacteroidota
>WENV170096386
CEAK01015026
140771
Bacteroidota
>WENV170096452
CEAK01017105
140771
Bacteroidota
>WENV170096129
CEAK01005241
176192
Bacteroidota
TCT
Arg
>WENV170096462
CEAK01017417
176192
Bacteroidota
TCT
Arg
>WENV170096466
CEAK01017883
176192
Bacteroidota
TCT
Arg
>WENV170096629
CEAK01025440
481328
Bacteroidota
TTG
Gln
>WENV170096855
CEAK01035608
400088
Bacteroidota
GGT
Thr
>WENV170096015
CEAK01000595
69204
Bacteroidota
TGA
Ser
>WENV170096289
CEAK01011487
69204
Bacteroidota
TGA
Ser
>WENV170096712
CEAK01029132
69204
Bacteroidota
TGA
Ser
>WENV170096713
CEAK01029132
69204
Bacteroidota
TGA
Ser
>WENV170096151
CEAK01005807
280446
Bacteroidota
TTT
Lys
>WENV170096578
CEAK01022997
280446
Bacteroidota
TTT
Lys
>WENV170096668
CEAK01027977
280446
Bacteroidota
TTT
Lys
>WENV170096080
CEAK01002632
484496
Bacteroidota
TTG
Gln
>WENV170096210
CEAK01008399
484496
Bacteroidota
TTG
Gln
>WENV170096432
CEAK01016278
484496
Bacteroidota
TTG
Gln
>WENV170096545
CEAK01021204
27502
Bacteroidota
GGA
Ser
>WENV170096811
CEAK01033996
27502
Bacteroidota
GGA
Ser
>WENV170096617
CEAK01025105
285750
Bacteroidota
CCC
Gly
>WENV170096653
CEAK01026990
285750
Bacteroidota
CCC
Gly
>WENV170096242
CEAK01009857
365112
Bacteroidota
TTT
Lys
>WENV170096268
CEAK01010549
365112
Bacteroidota
TTT
Lys
>WENV170096276
CEAK01010758
365112
Bacteroidota
TTT
Lys
>WENV170096649
CEAK01026709
365112
Bacteroidota
TTT
Lys
>WENV170096781
CEAK01032177
365112
Bacteroidota
TTT
Lys
>WENV170096144
CEAK01005475
398836
Bacteroidota
GCA
Cys
>WENV170096198
CEAK01008093
398836
Bacteroidota
GCA
Cys
>WENV170096416
CEAK01015697
398836
Bacteroidota
GCA
Cys
>WENV170096203
CEAK01008095
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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