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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
135 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170105269
CEBV01000698
186874
Bacteroidota
CAT
Met
>WENV170105282
CEBV01001541
398829
Bacteroidota
CCT
Arg
>WENV170105291
CEBV01002264
176192
Bacteroidota
TCT
Arg
>WENV170105330
CEBV01004208
20206
Bacteroidota
GGA
Ser
>WENV170105332
CEBV01004237
285360
Bacteroidota
TTT
Lys
>WENV170105353
CEBV01005455
175838
Bacteroidota
GTT
Asn
>WENV170105354
CEBV01005455
175838
Bacteroidota
GTT
Asn
>WENV170105355
CEBV01005514
117741
Bacteroidota
TAG
Leu
>WENV170105369
CEBV01006654
203954
Bacteroidota
GTC
Asp
>WENV170105378
CEBV01007377
99847
Bacteroidota
GTA
Tyr
>WENV170105397
CEBV01008253
118089
Bacteroidota
TAG
Leu
>WENV170105399
CEBV01008293
280553
Bacteroidota
TTT
Lys
>WENV170105400
CEBV01008361
183889
Bacteroidota
GGC
Ala
>WENV170105405
CEBV01008596
483416
Bacteroidota
CTG
Gln
>WENV170105421
CEBV01009381
186874
Bacteroidota
CAT
Met
>WENV170105422
CEBV01009409
21127
Bacteroidota
GGA
Ser
>WENV170105443
CEBV01010110
175844
Bacteroidota
GGC
Ala
>WENV170105466
CEBV01010901
20492
Bacteroidota
GGA
Ser
>WENV170105471
CEBV01011197
201819
Bacteroidota
CAT
Met
>WENV170105472
CEBV01011197
201819
Bacteroidota
CAT
Met
>WENV170105475
CEBV01011278
175903
Bacteroidota
GTG
His
>WENV170105485
CEBV01011325
285360
Bacteroidota
TTT
Lys
>WENV170105487
CEBV01011668
289031
Bacteroidota
CAT
Met
>WENV170105488
CEBV01011670
280557
Bacteroidota
CAT
Met
>WENV170105489
CEBV01011670
280557
Bacteroidota
CAT
Met
>WENV170105501
CEBV01012165
488746
Bacteroidota
CTG
Gln
>WENV170105502
CEBV01012165
158068
Bacteroidota
GGG
Pro
>WENV170105511
CEBV01012724
280446
Bacteroidota
TTT
Lys
>WENV170105512
CEBV01012832
182267
Bacteroidota
GTT
Asn
>WENV170105513
CEBV01012832
182267
Bacteroidota
GTT
Asn
>WENV170105515
CEBV01012853
175906
Bacteroidota
GTG
His
>WENV170105516
CEBV01012853
175906
Bacteroidota
GTG
His
>WENV170105517
CEBV01012863
280478
Bacteroidota
GCC
Gly
>WENV170105527
CEBV01013234
399200
Bacteroidota
CAT
Met
>WENV170105562
CEBV01014836
398860
Bacteroidota
CTC
Glu
>WENV170105569
CEBV01014861
280446
Bacteroidota
TTT
Lys
>WENV170105578
CEBV01014954
56072
Bacteroidota
TAA
Leu
>WENV170105599
CEBV01015450
203954
Bacteroidota
GTC
Asp
>WENV170105603
CEBV01015705
280557
Bacteroidota
CAT
Met
>WENV170105629
CEBV01016896
399200
Bacteroidota
CAT
Met
>WENV170105656
CEBV01017788
285750
Bacteroidota
CCC
Gly
>WENV170105658
CEBV01018171
57807
Bacteroidota
TGA
Ser
>WENV170105659
CEBV01018184
29791
Bacteroidota
GCT
Ser
>WENV170105660
CEBV01018184
398860
Bacteroidota
CTC
Glu
>WENV170105685
CEBV01018921
398828
Bacteroidota
CCG
Arg
>WENV170105711
CEBV01019674
118089
Bacteroidota
TAG
Leu
>WENV170105738
CEBV01020502
182267
Bacteroidota
GTT
Asn
>WENV170105739
CEBV01020502
182267
Bacteroidota
GTT
Asn
>WENV170105740
CEBV01020502
182267
Bacteroidota
GTT
Asn
>WENV170105741
CEBV01020502
182267
Bacteroidota
GTT
Asn
>WENV170105742
CEBV01020502
182267
Bacteroidota
GTT
Asn
>WENV170105752
CEBV01020879
156068
Bacteroidota
TAC
Val
>WENV170105753
CEBV01020879
156068
Bacteroidota
TAC
Val
>WENV170105754
CEBV01020879
156068
Bacteroidota
TAC
Val
>WENV170105760
CEBV01021010
398836
Bacteroidota
GCA
Cys
>WENV170105787
CEBV01022011
56493
Bacteroidota
TGA
Ser
>WENV170105789
CEBV01022011
140771
Bacteroidota
>WENV170105792
CEBV01022011
140771
Bacteroidota
>WENV170105795
CEBV01022011
140771
Bacteroidota
>WENV170105798
CEBV01022011
140771
Bacteroidota
>WENV170105803
CEBV01022029
399200
Bacteroidota
CAT
Met
>WENV170105804
CEBV01022029
399200
Bacteroidota
CAT
Met
>WENV170105808
CEBV01022316
56072
Bacteroidota
TAA
Leu
>WENV170105809
CEBV01022403
280553
Bacteroidota
TTT
Lys
>WENV170105848
CEBV01023847
398828
Bacteroidota
CCG
Arg
>WENV170105852
CEBV01023922
56493
Bacteroidota
TGA
Ser
>WENV170105853
CEBV01023922
57807
Bacteroidota
TGA
Ser
>WENV170105865
CEBV01024399
175838
Bacteroidota
GTT
Asn
>WENV170105866
CEBV01024399
175838
Bacteroidota
GTT
Asn
>WENV170105877
CEBV01025108
176192
Bacteroidota
TCT
Arg
>WENV170105878
CEBV01025113
57807
Bacteroidota
TGA
Ser
>WENV170105890
CEBV01025888
280478
Bacteroidota
GCC
Gly
>WENV170105905
CEBV01026381
186874
Bacteroidota
CAT
Met
>WENV170105907
CEBV01026457
57807
Bacteroidota
TGA
Ser
>WENV170105934
CEBV01027861
158068
Bacteroidota
GGG
Pro
>WENV170105948
CEBV01028290
398860
Bacteroidota
CTC
Glu
>WENV170105956
CEBV01028700
187400
Bacteroidota
GTT
Asn
>WENV170105957
CEBV01028700
187400
Bacteroidota
GTT
Asn
>WENV170105975
CEBV01029471
56493
Bacteroidota
TGA
Ser
>WENV170105977
CEBV01029478
175903
Bacteroidota
GTG
His
>WENV170105980
CEBV01029886
57807
Bacteroidota
TGA
Ser
>WENV170105987
CEBV01030325
398836
Bacteroidota
GCA
Cys
>WENV170106004
CEBV01031106
175902
Bacteroidota
GGC
Ala
>WENV170106005
CEBV01031147
280451
Bacteroidota
CGT
Thr
>WENV170106012
CEBV01031387
159415
Bacteroidota
TAC
Val
>WENV170106013
CEBV01031387
159415
Bacteroidota
TAC
Val
>WENV170106014
CEBV01031387
159415
Bacteroidota
TAC
Val
>WENV170106024
CEBV01031917
175844
Bacteroidota
GGC
Ala
>WENV170106026
CEBV01031944
176192
Bacteroidota
TCT
Arg
>WENV170106037
CEBV01032293
398836
Bacteroidota
GCA
Cys
>WENV170106038
CEBV01032293
398836
Bacteroidota
GCA
Cys
>WENV170106044
CEBV01032657
21127
Bacteroidota
GGA
Ser
>WENV170106056
CEBV01032953
57807
Bacteroidota
TGA
Ser
>WENV170106066
CEBV01033461
56072
Bacteroidota
TAA
Leu
>WENV170106121
CEBV01035795
117741
Bacteroidota
TAG
Leu
>WENV170106129
CEBV01036309
156068
Bacteroidota
TAC
Val
>WENV170106130
CEBV01036309
156068
Bacteroidota
TAC
Val
>WENV170106131
CEBV01036309
156068
Bacteroidota
TAC
Val
>WENV170106132
CEBV01036309
156068
Bacteroidota
TAC
Val
>WENV170106140
CEBV01036718
117741
Bacteroidota
TAG
Leu
>WENV170106155
CEBV01037671
480404
Bacteroidota
TTG
Gln
>WENV170106172
CEBV01038382
140771
Bacteroidota
>WENV170106175
CEBV01038382
140771
Bacteroidota
>WENV170106177
CEBV01038382
140771
Bacteroidota
>WENV170106186
CEBV01038450
484496
Bacteroidota
TTG
Gln
>WENV170106187
CEBV01038510
158068
Bacteroidota
GGG
Pro
>WENV170106188
CEBV01038518
158068
Bacteroidota
GGG
Pro
>WENV170106198
CEBV01039156
74084
Bacteroidota
CAG
Leu
>WENV170106208
CEBV01039842
398836
Bacteroidota
GCA
Cys
>WENV170106237
CEBV01040693
159415
Bacteroidota
TAC
Val
>WENV170106238
CEBV01040693
159415
Bacteroidota
TAC
Val
>WENV170106239
CEBV01040693
159415
Bacteroidota
TAC
Val
>WENV170106250
CEBV01041162
398829
Bacteroidota
CCT
Arg
>WENV170106252
CEBV01041473
404226
Bacteroidota
CCT
Arg
>WENV170106256
CEBV01041866
484496
Bacteroidota
TTG
Gln
>WENV170106302
CEBV01043295
175902
Bacteroidota
GGC
Ala
>WENV170106304
CEBV01043602
203954
Bacteroidota
GTC
Asp
>WENV170106313
CEBV01043948
175904
Bacteroidota
CGG
Pro
>WENV170106318
CEBV01044403
280478
Bacteroidota
GCC
Gly
>WENV170106320
CEBV01044403
280478
Bacteroidota
GCC
Gly
>WENV170106323
CEBV01044455
175906
Bacteroidota
GTG
His
>WENV170106330
CEBV01044826
398836
Bacteroidota
GCA
Cys
>WENV170106337
CEBV01044830
280446
Bacteroidota
TTT
Lys
>WENV170106350
CEBV01045156
158068
Bacteroidota
GGG
Pro
>WENV170106349
CEBV01045156
280446
Bacteroidota
TTT
Lys
>WENV170106357
CEBV01045666
29791
Bacteroidota
GCT
Ser
>WENV170106358
CEBV01045666
398860
Bacteroidota
CTC
Glu
>WENV170106362
CEBV01045903
57807
Bacteroidota
TGA
Ser
>WENV170106392
CEBV01047193
99847
Bacteroidota
GTA
Tyr
>WENV170106407
CEBV01048023
398829
Bacteroidota
CCT
Arg
>WENV170106421
CEBV01048350
56493
Bacteroidota
TGA
Ser
>WENV170106427
CEBV01048459
178907
Bacteroidota
TCT
Arg
>WENV170106429
CEBV01048847
99847
Bacteroidota
GTA
Tyr
>WENV170106439
CEBV01049592
280446
Bacteroidota
TTT
Lys
>WENV170106459
CEBV01050507
280446
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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