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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
112 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170110146
CECF01013016
295385
Bacteroidota
CCA
Trp
>WENV170111076
CECF01058718
295385
Bacteroidota
CCA
Trp
>WENV170110587
CECF01034750
285360
Bacteroidota
TTT
Lys
>WENV170110594
CECF01035310
117741
Bacteroidota
TAG
Leu
>WENV170110804
CECF01045034
117741
Bacteroidota
TAG
Leu
>WENV170110821
CECF01046075
398829
Bacteroidota
CCT
Arg
>WENV170110996
CECF01054916
175838
Bacteroidota
GTT
Asn
>WENV170110997
CECF01054916
175838
Bacteroidota
GTT
Asn
>WENV170110998
CECF01054916
175838
Bacteroidota
GTT
Asn
>WENV170109910
CECF01002790
404226
Bacteroidota
CCT
Arg
>WENV170110393
CECF01025507
175904
Bacteroidota
CGG
Pro
>WENV170110411
CECF01026080
175904
Bacteroidota
CGG
Pro
>WENV170109972
CECF01006068
289031
Bacteroidota
CAT
Met
>WENV170110814
CECF01045570
289031
Bacteroidota
CAT
Met
>WENV170109886
CECF01001601
280553
Bacteroidota
TTT
Lys
>WENV170110648
CECF01037526
280553
Bacteroidota
TTT
Lys
>WENV170110857
CECF01047775
280553
Bacteroidota
TTT
Lys
>WENV170110328
CECF01021725
280557
Bacteroidota
CAT
Met
>WENV170110917
CECF01051077
280557
Bacteroidota
CAT
Met
>WENV170111232
CECF01066677
280557
Bacteroidota
CAT
Met
>WENV170110263
CECF01018152
20206
Bacteroidota
GGA
Ser
>WENV170110264
CECF01018155
20206
Bacteroidota
GGA
Ser
>WENV170110926
CECF01051676
20206
Bacteroidota
GGA
Ser
>WENV170110322
CECF01021236
483416
Bacteroidota
CTG
Gln
>WENV170109908
CECF01002790
398871
Bacteroidota
TTC
Glu
>WENV170109909
CECF01002790
398871
Bacteroidota
TTC
Glu
>WENV170111106
CECF01060626
56493
Bacteroidota
TGA
Ser
>WENV170110643
CECF01037517
175906
Bacteroidota
GTG
His
>WENV170110786
CECF01044566
175906
Bacteroidota
GTG
His
>WENV170110787
CECF01044566
175906
Bacteroidota
GTG
His
>WENV170110839
CECF01046600
175903
Bacteroidota
GTG
His
>WENV170111157
CECF01063342
175903
Bacteroidota
GTG
His
>WENV170110080
CECF01009847
351598
Bacteroidota
CGG
Pro
>WENV170110310
CECF01020735
351598
Bacteroidota
CGG
Pro
>WENV170110697
CECF01039666
351598
Bacteroidota
CGG
Pro
>WENV170110898
CECF01050063
351598
Bacteroidota
CGG
Pro
>WENV170111209
CECF01065620
351598
Bacteroidota
CGG
Pro
>WENV170110547
CECF01032670
291612
Bacteroidota
>WENV170111286
CECF01068998
156068
Bacteroidota
TAC
Val
>WENV170111287
CECF01068998
156068
Bacteroidota
TAC
Val
>WENV170110925
CECF01051166
118089
Bacteroidota
TAG
Leu
>WENV170111010
CECF01055495
118089
Bacteroidota
TAG
Leu
>WENV170110394
CECF01025507
280530
Bacteroidota
CCA
Trp
>WENV170110220
CECF01016411
203954
Bacteroidota
GTC
Asp
>WENV170110412
CECF01026085
203954
Bacteroidota
GTC
Asp
>WENV170109939
CECF01003894
157895
Bacteroidota
TAC
Val
>WENV170109940
CECF01003894
157895
Bacteroidota
TAC
Val
>WENV170109941
CECF01003894
157895
Bacteroidota
TAC
Val
>WENV170109974
CECF01006096
157895
Bacteroidota
TAC
Val
>WENV170109975
CECF01006096
157895
Bacteroidota
TAC
Val
>WENV170111198
CECF01064593
157895
Bacteroidota
TAC
Val
>WENV170111199
CECF01064593
157895
Bacteroidota
TAC
Val
>WENV170110166
CECF01013304
178907
Bacteroidota
TCT
Arg
>WENV170111021
CECF01056058
178907
Bacteroidota
TCT
Arg
>WENV170110838
CECF01046237
405877
Bacteroidota
GGT
Thr
>WENV170109897
CECF01002192
20449
Bacteroidota
GGA
Ser
>WENV170110990
CECF01054486
20449
Bacteroidota
GGA
Ser
>WENV170109892
CECF01001881
21127
Bacteroidota
GGA
Ser
>WENV170111123
CECF01061720
56072
Bacteroidota
TAA
Leu
>WENV170110629
CECF01037125
57807
Bacteroidota
TGA
Ser
>WENV170111156
CECF01063295
57807
Bacteroidota
TGA
Ser
>WENV170110494
CECF01030865
175886
Bacteroidota
GGC
Ala
>WENV170110625
CECF01037056
175902
Bacteroidota
GGC
Ala
>WENV170111151
CECF01062885
175902
Bacteroidota
GGC
Ala
>WENV170110549
CECF01033044
480404
Bacteroidota
TTG
Gln
>WENV170110273
CECF01018553
280451
Bacteroidota
CGT
Thr
>WENV170110190
CECF01015268
99847
Bacteroidota
GTA
Tyr
>WENV170110693
CECF01039646
99847
Bacteroidota
GTA
Tyr
>WENV170110694
CECF01039647
99847
Bacteroidota
GTA
Tyr
>WENV170110140
CECF01012547
399200
Bacteroidota
CAT
Met
>WENV170110365
CECF01023861
399200
Bacteroidota
CAT
Met
>WENV170110376
CECF01024386
399200
Bacteroidota
CAT
Met
>WENV170110725
CECF01041263
186874
Bacteroidota
CAT
Met
>WENV170111050
CECF01057491
186874
Bacteroidota
CAT
Met
>WENV170110379
CECF01024421
488746
Bacteroidota
CTG
Gln
>WENV170110014
CECF01007117
280478
Bacteroidota
GCC
Gly
>WENV170110107
CECF01010718
280478
Bacteroidota
GCC
Gly
>WENV170110109
CECF01010718
280478
Bacteroidota
GCC
Gly
>WENV170110503
CECF01030967
280478
Bacteroidota
GCC
Gly
>WENV170110413
CECF01026088
73011
Bacteroidota
CAA
Leu
>WENV170110217
CECF01015939
158068
Bacteroidota
GGG
Pro
>WENV170110480
CECF01030286
158068
Bacteroidota
GGG
Pro
>WENV170109894
CECF01002029
398828
Bacteroidota
CCG
Arg
>WENV170110373
CECF01024230
398828
Bacteroidota
CCG
Arg
>WENV170111220
CECF01066221
398828
Bacteroidota
CCG
Arg
>WENV170111191
CECF01064568
74084
Bacteroidota
CAG
Leu
>WENV170109866
CECF01000564
480325
Bacteroidota
CTG
Gln
>WENV170109867
CECF01000564
480325
Bacteroidota
CTG
Gln
>WENV170110567
CECF01033611
480325
Bacteroidota
CTG
Gln
>WENV170110234
CECF01016948
140771
Bacteroidota
>WENV170110319
CECF01021126
140771
Bacteroidota
>WENV170110576
CECF01034047
140771
Bacteroidota
>WENV170110578
CECF01034047
140771
Bacteroidota
>WENV170110203
CECF01015844
176192
Bacteroidota
TCT
Arg
>WENV170110892
CECF01049977
280446
Bacteroidota
TTT
Lys
>WENV170111088
CECF01059495
280446
Bacteroidota
TTT
Lys
>WENV170111230
CECF01066355
280446
Bacteroidota
TTT
Lys
>WENV170111252
CECF01067323
280446
Bacteroidota
TTT
Lys
>WENV170110602
CECF01035741
280446
Bacteroidota
TTT
Lys
>WENV170110746
CECF01042677
280446
Bacteroidota
TTT
Lys
>WENV170110768
CECF01043406
280446
Bacteroidota
TTT
Lys
>WENV170110079
CECF01009838
484496
Bacteroidota
TTG
Gln
>WENV170111102
CECF01060060
484496
Bacteroidota
TTG
Gln
>WENV170110561
CECF01033522
285750
Bacteroidota
CCC
Gly
>WENV170110734
CECF01041812
285750
Bacteroidota
CCC
Gly
>WENV170110410
CECF01026078
156467
Bacteroidota
TGG
Pro
>WENV170109900
CECF01002198
398836
Bacteroidota
GCA
Cys
>WENV170110261
CECF01018140
398836
Bacteroidota
GCA
Cys
>WENV170110443
CECF01027575
398836
Bacteroidota
GCA
Cys
>WENV170110474
CECF01030164
398836
Bacteroidota
GCA
Cys
>WENV170110617
CECF01036169
398836
Bacteroidota
GCA
Cys
>WENV170111153
CECF01062930
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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