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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170249668
CEQS01029008
448583
Bacteroidota
GGT
Thr
>WENV170249511
CEQS01018135
156076
Bacteroidota
TAC
Val
>WENV170250261
CEQS01074263
198599
Bacteroidota
GTG
His
>WENV170249492
CEQS01017433
222068
Bacteroidota
GAT
Ile
>WENV170249649
CEQS01027768
240785
Bacteroidota
GTC
Asp
>WENV170250414
CEQS01130452
402171
Bacteroidota
TTC
Glu
>WENV170249875
CEQS01048114
155808
Bacteroidota
TGG
Pro
>WENV170249926
CEQS01052270
227539
Bacteroidota
GTT
Asn
>WENV170250263
CEQS01074284
227539
Bacteroidota
GTT
Asn
>WENV170249545
CEQS01021490
299065
Bacteroidota
TTG
Gln
>WENV170250236
CEQS01073708
215303
Bacteroidota
GTC
Asp
>WENV170250057
CEQS01063829
231584
Bacteroidota
TCT
Arg
>WENV170250141
CEQS01070271
181598
Bacteroidota
GTT
Asn
>WENV170250113
CEQS01067918
347386
Bacteroidota
CCA
Trp
>WENV170250133
CEQS01069738
347386
Bacteroidota
CCA
Trp
>WENV170249670
CEQS01029008
281130
Bacteroidota
GAA
Phe
>WENV170250221
CEQS01072921
118418
Bacteroidota
TAG
Leu
>WENV170249382
CEQS01009090
182234
Bacteroidota
TGT
Thr
>WENV170250353
CEQS01106401
176817
Bacteroidota
CAT
Met
>WENV170250269
CEQS01074335
200485
Bacteroidota
CAT
Met
>WENV170250038
CEQS01062644
24958
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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