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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170260943
CERB01024795
400818
Bacteroidota
TTC
Glu
>WENV170261180
CERB01045646
400818
Bacteroidota
TTC
Glu
>WENV170261234
CERB01050882
400818
Bacteroidota
TTC
Glu
>WENV170262654
CERB01291690
179597
Bacteroidota
GTG
His
>WENV170262277
CERB01167847
281538
Bacteroidota
GAA
Phe
>WENV170262304
CERB01170264
179596
Bacteroidota
GGG
Pro
>WENV170261510
CERB01082498
156605
Bacteroidota
GAC
Val
>WENV170261601
CERB01091552
305664
Bacteroidota
CAT
Met
>WENV170261624
CERB01094257
305664
Bacteroidota
CAT
Met
>WENV170260880
CERB01018665
155808
Bacteroidota
TGG
Pro
>WENV170261643
CERB01096134
155808
Bacteroidota
TGG
Pro
>WENV170262328
CERB01172036
15274
Bacteroidota
GCT
Ser
>WENV170262110
CERB01148479
483389
Bacteroidota
GCA
Cys
>WENV170262683
CERB01303436
286857
Bacteroidota
TTT
Lys
>WENV170260990
CERB01030329
21872
Bacteroidota
GGA
Ser
>WENV170261195
CERB01047881
181598
Bacteroidota
GTT
Asn
>WENV170261460
CERB01077407
282832
Bacteroidota
TTG
Gln
>WENV170261737
CERB01105932
192374
Bacteroidota
GAT
Ile
>WENV170261229
CERB01050566
56162
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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