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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170262879
CERC01002763
179597
Bacteroidota
GTG
His
>WENV170263345
CERC01037496
156076
Bacteroidota
TAC
Val
>WENV170263367
CERC01040100
120026
Bacteroidota
GTA
Tyr
>WENV170263352
CERC01038300
209752
Bacteroidota
GGC
Ala
>WENV170263718
CERC01066828
179596
Bacteroidota
GGG
Pro
>WENV170263699
CERC01066615
20865
Bacteroidota
GGA
Ser
>WENV170263296
CERC01032401
320084
Bacteroidota
TTT
Lys
>WENV170263297
CERC01032401
320084
Bacteroidota
TTT
Lys
>WENV170263734
CERC01066869
155808
Bacteroidota
TGG
Pro
>WENV170263733
CERC01066869
15274
Bacteroidota
GCT
Ser
>WENV170263717
CERC01066818
483389
Bacteroidota
GCA
Cys
>WENV170264020
CERC01133968
200516
Bacteroidota
CAT
Met
>WENV170263592
CERC01060431
215303
Bacteroidota
GTC
Asp
>WENV170263472
CERC01051495
284409
Bacteroidota
CAT
Met
>WENV170263429
CERC01046460
296664
Bacteroidota
GAA
Phe
>WENV170263370
CERC01040100
295349
Bacteroidota
CCA
Trp
>WENV170262878
CERC01002763
179598
Bacteroidota
CAT
Met
>WENV170262950
CERC01006926
179598
Bacteroidota
CAT
Met
>WENV170263413
CERC01044482
74874
Bacteroidota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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