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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170283611
CERU01038684
281538
Bacteroidota
GAA
Phe
>WENV170283525
CERU01028487
156605
Bacteroidota
GAC
Val
>WENV170283703
CERU01086627
156756
Bacteroidota
TGG
Pro
>WENV170283471
CERU01017067
303411
Bacteroidota
>WENV170283358
CERU01002484
281190
Bacteroidota
CAT
Met
>WENV170283765
CERU01109357
282369
Bacteroidota
TTT
Lys
>WENV170283387
CERU01005779
155808
Bacteroidota
TGG
Pro
>WENV170283610
CERU01038668
155808
Bacteroidota
TGG
Pro
>WENV170283388
CERU01005779
176707
Bacteroidota
TCT
Arg
>WENV170283575
CERU01037119
291910
Bacteroidota
TTG
Gln
>WENV170283798
CERU01112254
74253
Bacteroidota
GCT
Ser
>WENV170283411
CERU01008756
298625
Bacteroidota
CAT
Met
>WENV170283787
CERU01111727
156596
Bacteroidota
TAC
Val
>WENV170283781
CERU01111404
183856
Bacteroidota
CAT
Met
>WENV170283757
CERU01107706
181598
Bacteroidota
GTT
Asn
>WENV170283761
CERU01108214
189252
Bacteroidota
GGC
Ala
>WENV170283764
CERU01109288
296664
Bacteroidota
GAA
Phe
>WENV170283800
CERU01112256
179598
Bacteroidota
CAT
Met
>WENV170283627
CERU01038890
399343
Bacteroidota
TTC
Glu
>WENV170283772
CERU01110488
56162
Bacteroidota
TGA
Ser
>WENV170283599
CERU01038371
299085
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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