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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170287420
CERX01017682
400818
Bacteroidota
TTC
Glu
>WENV170287552
CERX01025122
400818
Bacteroidota
TTC
Glu
>WENV170287995
CERX01059572
400818
Bacteroidota
TTC
Glu
>WENV170288885
CERX01130040
400818
Bacteroidota
TTC
Glu
>WENV170289795
CERX01267260
179597
Bacteroidota
GTG
His
>WENV170288641
CERX01110175
156076
Bacteroidota
TAC
Val
>WENV170289240
CERX01151356
156076
Bacteroidota
TAC
Val
>WENV170287345
CERX01013554
156595
Bacteroidota
TGG
Pro
>WENV170289328
CERX01155936
156595
Bacteroidota
TGG
Pro
>WENV170289282
CERX01153512
179596
Bacteroidota
GGG
Pro
>WENV170287713
CERX01037378
156605
Bacteroidota
GAC
Val
>WENV170287769
CERX01041295
402171
Bacteroidota
TTC
Glu
>WENV170288094
CERX01066312
402171
Bacteroidota
TTC
Glu
>WENV170288943
CERX01134296
155808
Bacteroidota
TGG
Pro
>WENV170288657
CERX01111395
176812
Bacteroidota
TCT
Arg
>WENV170289136
CERX01145809
291910
Bacteroidota
TTG
Gln
>WENV170288751
CERX01120101
121312
Bacteroidota
TAG
Leu
>WENV170288906
CERX01131862
121312
Bacteroidota
TAG
Leu
>WENV170287861
CERX01049243
299065
Bacteroidota
TTG
Gln
>WENV170288556
CERX01103620
299065
Bacteroidota
TTG
Gln
>WENV170288568
CERX01105170
483389
Bacteroidota
GCA
Cys
>WENV170289411
CERX01159000
483389
Bacteroidota
GCA
Cys
>WENV170289028
CERX01139605
181598
Bacteroidota
GTT
Asn
>WENV170287544
CERX01024584
399898
Bacteroidota
GGT
Thr
>WENV170287216
CERX01006231
182234
Bacteroidota
TGT
Thr
>WENV170287369
CERX01014717
183480
Bacteroidota
TGC
Ala
>WENV170287411
CERX01016910
183480
Bacteroidota
TGC
Ala
>WENV170288430
CERX01093916
295349
Bacteroidota
CCA
Trp
>WENV170288461
CERX01096199
179817
Bacteroidota
GGC
Ala
>WENV170289257
CERX01152609
179598
Bacteroidota
CAT
Met
>WENV170287254
CERX01008764
56162
Bacteroidota
TGA
Ser
>WENV170287543
CERX01024565
56162
Bacteroidota
TGA
Ser
>WENV170287205
CERX01005800
299085
Bacteroidota
TTT
Lys
>WENV170288574
CERX01105523
299085
Bacteroidota
TTT
Lys
>WENV170289076
CERX01142451
74874
Bacteroidota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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