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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170309933
CESM01001060
400818
Bacteroidota
TTC
Glu
>WENV170310352
CESM01032749
400818
Bacteroidota
TTC
Glu
>WENV170311335
CESM01130984
400818
Bacteroidota
TTC
Glu
>WENV170311353
CESM01132061
400818
Bacteroidota
TTC
Glu
>WENV170312250
CESM01229654
400818
Bacteroidota
TTC
Glu
>WENV170311845
CESM01192951
198599
Bacteroidota
GTG
His
>WENV170312095
CESM01219093
198599
Bacteroidota
GTG
His
>WENV170312530
CESM01296097
120026
Bacteroidota
GTA
Tyr
>WENV170311328
CESM01130284
156605
Bacteroidota
GAC
Val
>WENV170311833
CESM01191388
156605
Bacteroidota
GAC
Val
>WENV170310772
CESM01071615
305664
Bacteroidota
CAT
Met
>WENV170312498
CESM01277516
282369
Bacteroidota
TTT
Lys
>WENV170311545
CESM01153278
155786
Bacteroidota
TGG
Pro
>WENV170310890
CESM01082300
155808
Bacteroidota
TGG
Pro
>WENV170311076
CESM01102319
155808
Bacteroidota
TGG
Pro
>WENV170312272
CESM01230552
155808
Bacteroidota
TGG
Pro
>WENV170312319
CESM01233617
155808
Bacteroidota
TGG
Pro
>WENV170312362
CESM01235141
176812
Bacteroidota
TCT
Arg
>WENV170311546
CESM01153278
176707
Bacteroidota
TCT
Arg
>WENV170310393
CESM01036662
177083
Bacteroidota
TGT
Thr
>WENV170311610
CESM01163890
21789
Bacteroidota
GGA
Ser
>WENV170310189
CESM01019552
121312
Bacteroidota
TAG
Leu
>WENV170309975
CESM01004325
299065
Bacteroidota
TTG
Gln
>WENV170310036
CESM01008236
299065
Bacteroidota
TTG
Gln
>WENV170310791
CESM01073224
299065
Bacteroidota
TTG
Gln
>WENV170310882
CESM01081373
483389
Bacteroidota
GCA
Cys
>WENV170312056
CESM01216204
483389
Bacteroidota
GCA
Cys
>WENV170310459
CESM01041750
193718
Bacteroidota
GTC
Asp
>WENV170310789
CESM01073098
193718
Bacteroidota
GTC
Asp
>WENV170311206
CESM01116526
193718
Bacteroidota
GTC
Asp
>WENV170310310
CESM01028933
286464
Bacteroidota
CAT
Met
>WENV170310703
CESM01063144
181598
Bacteroidota
GTT
Asn
>WENV170310033
CESM01008112
206043
Bacteroidota
GTC
Asp
>WENV170310123
CESM01013805
183480
Bacteroidota
TGC
Ala
>WENV170310456
CESM01041580
296664
Bacteroidota
GAA
Phe
>WENV170310453
CESM01041242
399343
Bacteroidota
TTC
Glu
>WENV170312331
CESM01234285
56162
Bacteroidota
TGA
Ser
>WENV170312370
CESM01235422
56162
Bacteroidota
TGA
Ser
>WENV170310347
CESM01032481
299085
Bacteroidota
TTT
Lys
>WENV170312238
CESM01229079
299085
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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