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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170314565
CESO01008855
402532
Bacteroidota
GCC
Gly
>WENV170314721
CESO01023681
400818
Bacteroidota
TTC
Glu
>WENV170315356
CESO01111814
400818
Bacteroidota
TTC
Glu
>WENV170315369
CESO01114460
191838
Bacteroidota
CAT
Met
>WENV170314794
CESO01030935
222068
Bacteroidota
GAT
Ile
>WENV170314569
CESO01009381
364431
Bacteroidota
TCC
Gly
>WENV170314665
CESO01019453
364431
Bacteroidota
TCC
Gly
>WENV170315010
CESO01054690
364431
Bacteroidota
TCC
Gly
>WENV170315135
CESO01070635
364431
Bacteroidota
TCC
Gly
>WENV170315512
CESO01132107
364431
Bacteroidota
TCC
Gly
>WENV170315548
CESO01133728
281190
Bacteroidota
CAT
Met
>WENV170315504
CESO01131780
365088
Bacteroidota
TCC
Gly
>WENV170314641
CESO01018018
240785
Bacteroidota
GTC
Asp
>WENV170315055
CESO01059238
240785
Bacteroidota
GTC
Asp
>WENV170315125
CESO01069516
240785
Bacteroidota
GTC
Asp
>WENV170315178
CESO01078774
240785
Bacteroidota
GTC
Asp
>WENV170314623
CESO01016467
447465
Bacteroidota
CCT
Arg
>WENV170315023
CESO01055938
15274
Bacteroidota
GCT
Ser
>WENV170315557
CESO01134140
399285
Bacteroidota
TTC
Glu
>WENV170315253
CESO01091626
227539
Bacteroidota
GTT
Asn
>WENV170315882
CESO01314810
344563
Bacteroidota
TTG
Gln
>WENV170315859
CESO01305608
285588
Bacteroidota
TTT
Lys
>WENV170315437
CESO01125058
235895
Bacteroidota
GTT
Asn
>WENV170315527
CESO01132865
183856
Bacteroidota
CAT
Met
>WENV170315354
CESO01111736
286464
Bacteroidota
CAT
Met
>WENV170315229
CESO01087740
231584
Bacteroidota
TCT
Arg
>WENV170314494
CESO01000290
372845
Bacteroidota
CCA
Trp
>WENV170314613
CESO01014615
372845
Bacteroidota
CCA
Trp
>WENV170314715
CESO01022824
372845
Bacteroidota
CCA
Trp
>WENV170314727
CESO01024145
372845
Bacteroidota
CCA
Trp
>WENV170315403
CESO01119115
372845
Bacteroidota
CCA
Trp
>WENV170315262
CESO01093697
182234
Bacteroidota
TGT
Thr
>WENV170315380
CESO01116118
176817
Bacteroidota
CAT
Met
>WENV170314498
CESO01000563
233847
Bacteroidota
TGC
Ala
>WENV170314801
CESO01031301
361792
Bacteroidota
GAA
Phe
>WENV170315051
CESO01058709
361792
Bacteroidota
GAA
Phe
>WENV170315140
CESO01071604
156255
Bacteroidota
TAC
Val
>WENV170315062
CESO01060297
156340
Bacteroidota
GGG
Pro
>WENV170315096
CESO01064284
156340
Bacteroidota
GGG
Pro
>WENV170314535
CESO01004547
56162
Bacteroidota
TGA
Ser
>WENV170315620
CESO01162269
183378
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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