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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170316203
CESP01023238
400818
Bacteroidota
TTC
Glu
>WENV170316493
CESP01048033
400818
Bacteroidota
TTC
Glu
>WENV170317018
CESP01105752
400818
Bacteroidota
TTC
Glu
>WENV170316853
CESP01087959
198599
Bacteroidota
GTG
His
>WENV170316945
CESP01098499
281538
Bacteroidota
GAA
Phe
>WENV170316207
CESP01023423
156605
Bacteroidota
GAC
Val
>WENV170317350
CESP01148331
156605
Bacteroidota
GAC
Val
>WENV170317379
CESP01151352
156605
Bacteroidota
GAC
Val
>WENV170317440
CESP01156574
23370
Bacteroidota
GGA
Ser
>WENV170317633
CESP01166107
281190
Bacteroidota
CAT
Met
>WENV170316131
CESP01016061
320084
Bacteroidota
TTT
Lys
>WENV170317218
CESP01130150
320084
Bacteroidota
TTT
Lys
>WENV170316732
CESP01073937
305664
Bacteroidota
CAT
Met
>WENV170316373
CESP01035882
320669
Bacteroidota
GAA
Phe
>WENV170316505
CESP01049084
320669
Bacteroidota
GAA
Phe
>WENV170316858
CESP01088537
320669
Bacteroidota
GAA
Phe
>WENV170317494
CESP01160638
320669
Bacteroidota
GAA
Phe
>WENV170316309
CESP01030422
155808
Bacteroidota
TGG
Pro
>WENV170316423
CESP01041262
155808
Bacteroidota
TGG
Pro
>WENV170317127
CESP01118316
155808
Bacteroidota
TGG
Pro
>WENV170317147
CESP01120954
155808
Bacteroidota
TGG
Pro
>WENV170316351
CESP01034173
197494
Bacteroidota
GTC
Asp
>WENV170317454
CESP01157945
197494
Bacteroidota
GTC
Asp
>WENV170317170
CESP01122726
21789
Bacteroidota
GGA
Ser
>WENV170317585
CESP01164889
156596
Bacteroidota
TAC
Val
>WENV170316296
CESP01029232
483389
Bacteroidota
GCA
Cys
>WENV170317282
CESP01139434
483389
Bacteroidota
GCA
Cys
>WENV170317510
CESP01161457
117927
Bacteroidota
TAG
Leu
>WENV170317310
CESP01142281
181598
Bacteroidota
GTT
Asn
>WENV170317468
CESP01159259
181598
Bacteroidota
GTT
Asn
>WENV170317684
CESP01177596
186849
Bacteroidota
TCT
Arg
>WENV170316921
CESP01095400
282831
Bacteroidota
TTT
Lys
>WENV170316447
CESP01043909
183480
Bacteroidota
TGC
Ala
>WENV170316088
CESP01012733
156424
Bacteroidota
TGG
Pro
>WENV170316909
CESP01093573
156340
Bacteroidota
GGG
Pro
>WENV170316552
CESP01054551
56162
Bacteroidota
TGA
Ser
>WENV170316895
CESP01091707
56162
Bacteroidota
TGA
Ser
>WENV170317221
CESP01130763
480568
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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