This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170326635
CESU01011967
400818
Bacteroidota
TTC
Glu
>WENV170327089
CESU01044012
156595
Bacteroidota
TGG
Pro
>WENV170326464
CESU01002379
120026
Bacteroidota
GTA
Tyr
>WENV170326678
CESU01014457
120026
Bacteroidota
GTA
Tyr
>WENV170326445
CESU01001640
156605
Bacteroidota
GAC
Val
>WENV170326570
CESU01007990
156605
Bacteroidota
GAC
Val
>WENV170327018
CESU01038509
156605
Bacteroidota
GAC
Val
>WENV170327142
CESU01047913
156605
Bacteroidota
GAC
Val
>WENV170327769
CESU01105159
156605
Bacteroidota
GAC
Val
>WENV170326791
CESU01021417
281336
Bacteroidota
TCC
Gly
>WENV170326840
CESU01025049
281336
Bacteroidota
TCC
Gly
>WENV170327183
CESU01051330
281336
Bacteroidota
TCC
Gly
>WENV170326822
CESU01023550
402090
Bacteroidota
TTG
Gln
>WENV170327842
CESU01107179
402090
Bacteroidota
TTG
Gln
>WENV170326585
CESU01008855
281190
Bacteroidota
CAT
Met
>WENV170326915
CESU01031289
223263
Bacteroidota
GTT
Asn
>WENV170326479
CESU01003473
365088
Bacteroidota
TCC
Gly
>WENV170327128
CESU01046450
336507
Bacteroidota
TCC
Gly
>WENV170326419
CESU01000678
130793
Bacteroidota
TAG
Leu
>WENV170326859
CESU01026558
402171
Bacteroidota
TTC
Glu
>WENV170326577
CESU01008346
155808
Bacteroidota
TGG
Pro
>WENV170327004
CESU01037957
155808
Bacteroidota
TGG
Pro
>WENV170327290
CESU01063556
155808
Bacteroidota
TGG
Pro
>WENV170327511
CESU01087029
366169
Bacteroidota
GAA
Phe
>WENV170326413
CESU01000371
197494
Bacteroidota
GTC
Asp
>WENV170326420
CESU01000695
197494
Bacteroidota
GTC
Asp
>WENV170327884
CESU01117442
185890
Bacteroidota
TGC
Ala
>WENV170327717
CESU01103246
227539
Bacteroidota
GTT
Asn
>WENV170327518
CESU01088626
344563
Bacteroidota
TTG
Gln
>WENV170327074
CESU01042570
156596
Bacteroidota
TAC
Val
>WENV170327868
CESU01107468
156596
Bacteroidota
TAC
Val
>WENV170326862
CESU01026637
299065
Bacteroidota
TTG
Gln
>WENV170327796
CESU01105930
299065
Bacteroidota
TTG
Gln
>WENV170326742
CESU01017362
193718
Bacteroidota
GTC
Asp
>WENV170327649
CESU01098880
193718
Bacteroidota
GTC
Asp
>WENV170326748
CESU01017757
200516
Bacteroidota
CAT
Met
>WENV170327544
CESU01091461
181598
Bacteroidota
GTT
Asn
>WENV170328051
CESU01184070
178179
Bacteroidota
GGC
Ala
>WENV170326427
CESU01000915
206043
Bacteroidota
GTC
Asp
>WENV170326428
CESU01000915
206043
Bacteroidota
GTC
Asp
>WENV170326516
CESU01006073
206043
Bacteroidota
GTC
Asp
>WENV170327469
CESU01082409
372845
Bacteroidota
CCA
Trp
>WENV170327572
CESU01093823
372845
Bacteroidota
CCA
Trp
>WENV170327574
CESU01093978
372845
Bacteroidota
CCA
Trp
>WENV170327638
CESU01098392
372845
Bacteroidota
CCA
Trp
>WENV170327030
CESU01038996
197245
Bacteroidota
TCT
Arg
>WENV170327032
CESU01039298
118418
Bacteroidota
TAG
Leu
>WENV170327669
CESU01100272
118418
Bacteroidota
TAG
Leu
>WENV170326680
CESU01014457
399898
Bacteroidota
GGT
Thr
>WENV170327049
CESU01041027
379077
Bacteroidota
TTT
Lys
>WENV170327676
CESU01101202
379077
Bacteroidota
TTT
Lys
>WENV170327433
CESU01078637
176817
Bacteroidota
CAT
Met
>WENV170326707
CESU01015528
460957
Bacteroidota
GCC
Gly
>WENV170326566
CESU01007847
24958
Bacteroidota
GGA
Ser
>WENV170327372
CESU01073503
176699
Bacteroidota
GTT
Asn
>WENV170326951
CESU01034325
361792
Bacteroidota
GAA
Phe
>WENV170327133
CESU01046909
361792
Bacteroidota
GAA
Phe
>WENV170327505
CESU01086414
437306
Bacteroidota
TTC
Glu
>WENV170327390
CESU01076005
162868
Bacteroidota
TAC
Val
>WENV170327592
CESU01095864
156340
Bacteroidota
GGG
Pro
>WENV170327222
CESU01055954
63365
Bacteroidota
TGA
Ser
>WENV170327722
CESU01103464
56162
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK