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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170369997
CETR01053400
295385
Bacteroidota
CCA
Trp
>WENV170370661
CETR01128429
193675
Bacteroidota
CAT
Met
>WENV170369522
CETR01012391
176863
Bacteroidota
CAT
Met
>WENV170369639
CETR01022060
402390
Bacteroidota
TTC
Glu
>WENV170369640
CETR01022060
402390
Bacteroidota
TTC
Glu
>WENV170369913
CETR01045685
198599
Bacteroidota
GTG
His
>WENV170370161
CETR01069315
198599
Bacteroidota
GTG
His
>WENV170369434
CETR01006515
281538
Bacteroidota
GAA
Phe
>WENV170370770
CETR01135854
281538
Bacteroidota
GAA
Phe
>WENV170369367
CETR01000359
120026
Bacteroidota
GTA
Tyr
>WENV170370666
CETR01129056
209752
Bacteroidota
GGC
Ala
>WENV170369561
CETR01015309
23370
Bacteroidota
GGA
Ser
>WENV170370656
CETR01127797
23370
Bacteroidota
GGA
Ser
>WENV170369543
CETR01014004
303411
Bacteroidota
>WENV170369617
CETR01019894
303411
Bacteroidota
>WENV170370753
CETR01135013
303411
Bacteroidota
>WENV170369797
CETR01034449
281190
Bacteroidota
CAT
Met
>WENV170370207
CETR01074874
281190
Bacteroidota
CAT
Met
>WENV170370724
CETR01133645
281190
Bacteroidota
CAT
Met
>WENV170369470
CETR01009570
282369
Bacteroidota
TTT
Lys
>WENV170369573
CETR01017102
282369
Bacteroidota
TTT
Lys
>WENV170370952
CETR01200969
155808
Bacteroidota
TGG
Pro
>WENV170369463
CETR01008546
176707
Bacteroidota
TCT
Arg
>WENV170369698
CETR01026689
291910
Bacteroidota
TTG
Gln
>WENV170370974
CETR01209974
291910
Bacteroidota
TTG
Gln
>WENV170369366
CETR01000359
177083
Bacteroidota
TGT
Thr
>WENV170370938
CETR01195529
185890
Bacteroidota
TGC
Ala
>WENV170369627
CETR01021028
298625
Bacteroidota
CAT
Met
>WENV170370745
CETR01134572
155807
Bacteroidota
GAC
Val
>WENV170370264
CETR01082025
299065
Bacteroidota
TTG
Gln
>WENV170370706
CETR01132296
299065
Bacteroidota
TTG
Gln
>WENV170369666
CETR01024088
286857
Bacteroidota
TTT
Lys
>WENV170369536
CETR01013101
193718
Bacteroidota
GTC
Asp
>WENV170369673
CETR01024675
21872
Bacteroidota
GGA
Ser
>WENV170371184
CETR01258951
299032
Bacteroidota
GCC
Gly
>WENV170369580
CETR01017651
117927
Bacteroidota
TAG
Leu
>WENV170370498
CETR01109259
181598
Bacteroidota
GTT
Asn
>WENV170371054
CETR01232450
182371
Bacteroidota
CAT
Met
>WENV170369959
CETR01051014
284409
Bacteroidota
CAT
Met
>WENV170370239
CETR01078642
284409
Bacteroidota
CAT
Met
>WENV170370409
CETR01100495
206043
Bacteroidota
GTC
Asp
>WENV170370586
CETR01121235
206043
Bacteroidota
GTC
Asp
>WENV170370727
CETR01133776
401036
Bacteroidota
CCT
Arg
>WENV170370692
CETR01131455
118418
Bacteroidota
TAG
Leu
>WENV170369796
CETR01034347
177901
Bacteroidota
GTT
Asn
>WENV170370360
CETR01092392
177901
Bacteroidota
GTT
Asn
>WENV170369916
CETR01046001
296664
Bacteroidota
GAA
Phe
>WENV170370121
CETR01065859
296664
Bacteroidota
GAA
Phe
>WENV170369369
CETR01000359
408604
Bacteroidota
GGT
Thr
>WENV170370003
CETR01054016
408604
Bacteroidota
GGT
Thr
>WENV170370515
CETR01111631
295349
Bacteroidota
CCA
Trp
>WENV170369838
CETR01038173
186597
Bacteroidota
GTG
His
>WENV170371239
CETR01266426
186597
Bacteroidota
GTG
His
>WENV170371074
CETR01235381
156424
Bacteroidota
TGG
Pro
>WENV170370624
CETR01124587
195088
Bacteroidota
CAT
Met
>WENV170369433
CETR01006504
399343
Bacteroidota
TTC
Glu
>WENV170369494
CETR01011365
399343
Bacteroidota
TTC
Glu
>WENV170369495
CETR01011365
399343
Bacteroidota
TTC
Glu
>WENV170369826
CETR01037254
56162
Bacteroidota
TGA
Ser
>WENV170371261
CETR01268524
56162
Bacteroidota
TGA
Ser
>WENV170371259
CETR01268440
480568
Bacteroidota
GCA
Cys
>WENV170370641
CETR01126483
179695
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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