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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170384710
CETY01008218
340026
Bacteroidota
CAT
Met
>WENV170386686
CETY01190799
179598
Bacteroidota
CAT
Met
>WENV170384954
CETY01026728
372845
Bacteroidota
CCA
Trp
>WENV170385260
CETY01053522
372845
Bacteroidota
CCA
Trp
>WENV170385487
CETY01072096
372845
Bacteroidota
CCA
Trp
>WENV170386628
CETY01186793
281538
Bacteroidota
GAA
Phe
>WENV170386210
CETY01145001
366169
Bacteroidota
GAA
Phe
>WENV170384945
CETY01025990
361792
Bacteroidota
GAA
Phe
>WENV170386502
CETY01176812
361792
Bacteroidota
GAA
Phe
>WENV170386821
CETY01197477
361792
Bacteroidota
GAA
Phe
>WENV170384691
CETY01007064
156605
Bacteroidota
GAC
Val
>WENV170385898
CETY01114799
15274
Bacteroidota
GCT
Ser
>WENV170386612
CETY01185828
227539
Bacteroidota
GTT
Asn
>WENV170385671
CETY01091047
156596
Bacteroidota
TAC
Val
>WENV170385901
CETY01114991
156596
Bacteroidota
TAC
Val
>WENV170386121
CETY01134106
156596
Bacteroidota
TAC
Val
>WENV170386723
CETY01192754
156596
Bacteroidota
TAC
Val
>WENV170385504
CETY01073293
130793
Bacteroidota
TAG
Leu
>WENV170384928
CETY01024738
117927
Bacteroidota
TAG
Leu
>WENV170384749
CETY01012215
364431
Bacteroidota
TCC
Gly
>WENV170384805
CETY01015757
364431
Bacteroidota
TCC
Gly
>WENV170384980
CETY01029664
364431
Bacteroidota
TCC
Gly
>WENV170385223
CETY01050632
364431
Bacteroidota
TCC
Gly
>WENV170386023
CETY01125205
364431
Bacteroidota
TCC
Gly
>WENV170384915
CETY01023647
56162
Bacteroidota
TGA
Ser
>WENV170385235
CETY01051736
56162
Bacteroidota
TGA
Ser
>WENV170386207
CETY01144628
185890
Bacteroidota
TGC
Ala
>WENV170385301
CETY01056458
183480
Bacteroidota
TGC
Ala
>WENV170385075
CETY01037124
155808
Bacteroidota
TGG
Pro
>WENV170384845
CETY01018811
400818
Bacteroidota
TTC
Glu
>WENV170385007
CETY01031669
400818
Bacteroidota
TTC
Glu
>WENV170385588
CETY01080724
400818
Bacteroidota
TTC
Glu
>WENV170385976
CETY01120735
344563
Bacteroidota
TTG
Gln
>WENV170386882
CETY01204334
282369
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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