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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170390927
CEUA01177478
281538
Bacteroidota
GAA
Phe
>WENV170389922
CEUA01054275
156605
Bacteroidota
GAC
Val
>WENV170390434
CEUA01110451
240785
Bacteroidota
GTC
Asp
>WENV170391209
CEUA01211924
240785
Bacteroidota
GTC
Asp
>WENV170391469
CEUA01232526
130793
Bacteroidota
TAG
Leu
>WENV170390889
CEUA01172223
185890
Bacteroidota
TGC
Ala
>WENV170391301
CEUA01220197
227539
Bacteroidota
GTT
Asn
>WENV170391765
CEUA01357698
155807
Bacteroidota
GAC
Val
>WENV170390895
CEUA01173141
231584
Bacteroidota
TCT
Arg
>WENV170391069
CEUA01197249
231584
Bacteroidota
TCT
Arg
>WENV170390433
CEUA01110284
372845
Bacteroidota
CCA
Trp
>WENV170390853
CEUA01167217
372845
Bacteroidota
CCA
Trp
>WENV170391000
CEUA01187645
372845
Bacteroidota
CCA
Trp
>WENV170389370
CEUA01009040
182234
Bacteroidota
TGT
Thr
>WENV170389936
CEUA01055809
24958
Bacteroidota
GGA
Ser
>WENV170391806
CEUA01386715
156424
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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