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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170394162
CEUC01012992
227539
Bacteroidota
GTT
Asn
>WENV170394205
CEUC01015595
366169
Bacteroidota
GAA
Phe
>WENV170394286
CEUC01019854
56162
Bacteroidota
TGA
Ser
>WENV170394514
CEUC01036144
379077
Bacteroidota
TTT
Lys
>WENV170394669
CEUC01047335
299065
Bacteroidota
TTG
Gln
>WENV170394768
CEUC01053658
372845
Bacteroidota
CCA
Trp
>WENV170394852
CEUC01061707
155786
Bacteroidota
TGG
Pro
>WENV170395113
CEUC01082921
177083
Bacteroidota
TGT
Thr
>WENV170395353
CEUC01102942
281538
Bacteroidota
GAA
Phe
>WENV170395413
CEUC01109758
235895
Bacteroidota
GTT
Asn
>WENV170395511
CEUC01117658
181598
Bacteroidota
GTT
Asn
>WENV170396130
CEUC01188757
156605
Bacteroidota
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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