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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170410561
CEUJ01112454
320669
Bacteroidota
GAA
Phe
>WENV170409924
CEUJ01058426
222068
Bacteroidota
GAT
Ile
>WENV170410018
CEUJ01065587
24958
Bacteroidota
GGA
Ser
>WENV170409300
CEUJ01016870
240785
Bacteroidota
GTC
Asp
>WENV170410490
CEUJ01106758
235895
Bacteroidota
GTT
Asn
>WENV170409781
CEUJ01048684
121312
Bacteroidota
TAG
Leu
>WENV170409293
CEUJ01016535
336507
Bacteroidota
TCC
Gly
>WENV170410463
CEUJ01104278
56162
Bacteroidota
TGA
Ser
>WENV170411186
CEUJ01166765
56162
Bacteroidota
TGA
Ser
>WENV170410290
CEUJ01087918
177083
Bacteroidota
TGT
Thr
>WENV170410371
CEUJ01095206
400818
Bacteroidota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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