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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170418268
CEUM01030500
281538
Bacteroidota
GAA
Phe
>WENV170418369
CEUM01036783
281538
Bacteroidota
GAA
Phe
>WENV170418788
CEUM01067259
281538
Bacteroidota
GAA
Phe
>WENV170418493
CEUM01045615
120026
Bacteroidota
GTA
Tyr
>WENV170417890
CEUM01009705
23370
Bacteroidota
GGA
Ser
>WENV170418069
CEUM01019094
240785
Bacteroidota
GTC
Asp
>WENV170418949
CEUM01082878
240785
Bacteroidota
GTC
Asp
>WENV170418321
CEUM01033464
402171
Bacteroidota
TTC
Glu
>WENV170419109
CEUM01097754
155808
Bacteroidota
TGG
Pro
>WENV170418759
CEUM01064791
227539
Bacteroidota
GTT
Asn
>WENV170419179
CEUM01104886
227539
Bacteroidota
GTT
Asn
>WENV170419762
CEUM01137389
286857
Bacteroidota
TTT
Lys
>WENV170419024
CEUM01088892
193718
Bacteroidota
GTC
Asp
>WENV170419559
CEUM01132135
231584
Bacteroidota
TCT
Arg
>WENV170418319
CEUM01033379
282832
Bacteroidota
TTG
Gln
>WENV170417984
CEUM01015598
372845
Bacteroidota
CCA
Trp
>WENV170418529
CEUM01048247
372845
Bacteroidota
CCA
Trp
>WENV170418546
CEUM01050186
372845
Bacteroidota
CCA
Trp
>WENV170419560
CEUM01132291
372845
Bacteroidota
CCA
Trp
>WENV170418381
CEUM01037705
233847
Bacteroidota
TGC
Ala
>WENV170418602
CEUM01054488
183480
Bacteroidota
TGC
Ala
>WENV170417972
CEUM01014852
361792
Bacteroidota
GAA
Phe
>WENV170418380
CEUM01037705
192374
Bacteroidota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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