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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170429109
CEUR01028803
400818
Bacteroidota
TTC
Glu
>WENV170429840
CEUR01077978
57660
Bacteroidota
TGA
Ser
>WENV170428865
CEUR01009232
156605
Bacteroidota
GAC
Val
>WENV170430094
CEUR01126114
155808
Bacteroidota
TGG
Pro
>WENV170429501
CEUR01061721
483389
Bacteroidota
GCA
Cys
>WENV170429301
CEUR01045714
181598
Bacteroidota
GTT
Asn
>WENV170428821
CEUR01006071
399898
Bacteroidota
GGT
Thr
>WENV170429398
CEUR01053842
56162
Bacteroidota
TGA
Ser
>WENV170428987
CEUR01018533
299085
Bacteroidota
TTT
Lys
>WENV170429312
CEUR01046653
299085
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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