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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170441977
CEUW01001137
372845
Bacteroidota
CCA
Trp
>WENV170442035
CEUW01005240
155808
Bacteroidota
TGG
Pro
>WENV170442038
CEUW01005557
372845
Bacteroidota
CCA
Trp
>WENV170442096
CEUW01009975
364431
Bacteroidota
TCC
Gly
>WENV170442120
CEUW01011846
155808
Bacteroidota
TGG
Pro
>WENV170442192
CEUW01017334
155808
Bacteroidota
TGG
Pro
>WENV170442282
CEUW01023708
222068
Bacteroidota
GAT
Ile
>WENV170442390
CEUW01033517
372845
Bacteroidota
CCA
Trp
>WENV170442394
CEUW01033723
281538
Bacteroidota
GAA
Phe
>WENV170442436
CEUW01038447
159415
Bacteroidota
TAC
Val
>WENV170442475
CEUW01042048
400818
Bacteroidota
TTC
Glu
>WENV170442573
CEUW01048382
231584
Bacteroidota
TCT
Arg
>WENV170442593
CEUW01049599
231584
Bacteroidota
TCT
Arg
>WENV170442637
CEUW01054538
24958
Bacteroidota
GGA
Ser
>WENV170442702
CEUW01061220
56162
Bacteroidota
TGA
Ser
>WENV170442870
CEUW01079596
193718
Bacteroidota
GTC
Asp
>WENV170443000
CEUW01090254
121312
Bacteroidota
TAG
Leu
>WENV170443117
CEUW01096657
361792
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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