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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170476880
CEVJ01001317
356216
Bacteroidota
TTT
Lys
>WENV170477133
CEVJ01039030
299085
Bacteroidota
TTT
Lys
>WENV170477143
CEVJ01040010
233847
Bacteroidota
TGC
Ala
>WENV170477196
CEVJ01044877
231584
Bacteroidota
TCT
Arg
>WENV170477241
CEVJ01050659
299065
Bacteroidota
TTG
Gln
>WENV170477296
CEVJ01057117
193675
Bacteroidota
CAT
Met
>WENV170477386
CEVJ01066979
240785
Bacteroidota
GTC
Asp
>WENV170477475
CEVJ01077889
299065
Bacteroidota
TTG
Gln
>WENV170477519
CEVJ01081443
281538
Bacteroidota
GAA
Phe
>WENV170477541
CEVJ01083941
281538
Bacteroidota
GAA
Phe
>WENV170477593
CEVJ01088258
291910
Bacteroidota
TTG
Gln
>WENV170477634
CEVJ01091878
183378
Bacteroidota
GGC
Ala
>WENV170477637
CEVJ01092087
206043
Bacteroidota
GTC
Asp
>WENV170477678
CEVJ01094866
198599
Bacteroidota
GTG
His
>WENV170477693
CEVJ01095425
281538
Bacteroidota
GAA
Phe
>WENV170477830
CEVJ01148650
155807
Bacteroidota
GAC
Val
>WENV170477864
CEVJ01164253
480568
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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