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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170491599
CEVQ01077226
193675
Bacteroidota
CAT
Met
>WENV170491231
CEVQ01045255
170858
Bacteroidota
TGG
Pro
>WENV170491335
CEVQ01053645
198599
Bacteroidota
GTG
His
>WENV170490822
CEVQ01020747
281538
Bacteroidota
GAA
Phe
>WENV170491902
CEVQ01103616
281538
Bacteroidota
GAA
Phe
>WENV170491706
CEVQ01087230
23370
Bacteroidota
GGA
Ser
>WENV170490820
CEVQ01020747
303411
Bacteroidota
>WENV170491038
CEVQ01033729
364431
Bacteroidota
TCC
Gly
>WENV170491820
CEVQ01098653
281190
Bacteroidota
CAT
Met
>WENV170492476
CEVQ01139232
240785
Bacteroidota
GTC
Asp
>WENV170491704
CEVQ01086911
336507
Bacteroidota
TCC
Gly
>WENV170490929
CEVQ01027007
179905
Bacteroidota
GTT
Asn
>WENV170492369
CEVQ01134925
299065
Bacteroidota
TTG
Gln
>WENV170491826
CEVQ01099276
117927
Bacteroidota
TAG
Leu
>WENV170490664
CEVQ01011477
372845
Bacteroidota
CCA
Trp
>WENV170492229
CEVQ01127679
401036
Bacteroidota
CCT
Arg
>WENV170491877
CEVQ01101527
118418
Bacteroidota
TAG
Leu
>WENV170491039
CEVQ01033729
436346
Bacteroidota
GGT
Thr
>WENV170490914
CEVQ01025846
182234
Bacteroidota
TGT
Thr
>WENV170490743
CEVQ01016030
24958
Bacteroidota
GGA
Ser
>WENV170490502
CEVQ01002507
356216
Bacteroidota
TTT
Lys
>WENV170492566
CEVQ01140918
195088
Bacteroidota
CAT
Met
>WENV170490805
CEVQ01019532
179598
Bacteroidota
CAT
Met
>WENV170492356
CEVQ01134243
56162
Bacteroidota
TGA
Ser
>WENV170491920
CEVQ01104691
299085
Bacteroidota
TTT
Lys
>WENV170491982
CEVQ01110242
183378
Bacteroidota
GGC
Ala
>WENV170490825
CEVQ01020747
480568
Bacteroidota
GCA
Cys
>WENV170491232
CEVQ01045255
179695
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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