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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170495841
CEVS01002710
402532
Bacteroidota
GCC
Gly
>WENV170496181
CEVS01034256
400818
Bacteroidota
TTC
Glu
>WENV170496306
CEVS01046950
400818
Bacteroidota
TTC
Glu
>WENV170496562
CEVS01074198
400818
Bacteroidota
TTC
Glu
>WENV170495985
CEVS01014237
156595
Bacteroidota
TGG
Pro
>WENV170497634
CEVS01198535
281538
Bacteroidota
GAA
Phe
>WENV170496053
CEVS01019194
156605
Bacteroidota
GAC
Val
>WENV170496097
CEVS01023068
156605
Bacteroidota
GAC
Val
>WENV170496524
CEVS01069356
156605
Bacteroidota
GAC
Val
>WENV170496760
CEVS01094244
156605
Bacteroidota
GAC
Val
>WENV170497356
CEVS01176948
156605
Bacteroidota
GAC
Val
>WENV170496264
CEVS01043201
281190
Bacteroidota
CAT
Met
>WENV170497313
CEVS01171928
291910
Bacteroidota
TTG
Gln
>WENV170495982
CEVS01014143
291910
Bacteroidota
TTG
Gln
>WENV170496067
CEVS01020895
291910
Bacteroidota
TTG
Gln
>WENV170496594
CEVS01076271
21789
Bacteroidota
GGA
Ser
>WENV170496902
CEVS01113391
21789
Bacteroidota
GGA
Ser
>WENV170497161
CEVS01147505
298625
Bacteroidota
CAT
Met
>WENV170496265
CEVS01043201
156596
Bacteroidota
TAC
Val
>WENV170497315
CEVS01172115
299065
Bacteroidota
TTG
Gln
>WENV170496238
CEVS01039838
483389
Bacteroidota
GCA
Cys
>WENV170496118
CEVS01025639
181598
Bacteroidota
GTT
Asn
>WENV170496197
CEVS01035535
181598
Bacteroidota
GTT
Asn
>WENV170497480
CEVS01187839
284409
Bacteroidota
CAT
Met
>WENV170497607
CEVS01197170
284409
Bacteroidota
CAT
Met
>WENV170497354
CEVS01176884
399898
Bacteroidota
GGT
Thr
>WENV170495905
CEVS01007744
183480
Bacteroidota
TGC
Ala
>WENV170496411
CEVS01056500
183480
Bacteroidota
TGC
Ala
>WENV170496707
CEVS01089357
183480
Bacteroidota
TGC
Ala
>WENV170496286
CEVS01044828
296664
Bacteroidota
GAA
Phe
>WENV170496289
CEVS01044971
296664
Bacteroidota
GAA
Phe
>WENV170496495
CEVS01065896
179598
Bacteroidota
CAT
Met
>WENV170496826
CEVS01102968
156340
Bacteroidota
GGG
Pro
>WENV170497124
CEVS01140592
156340
Bacteroidota
GGG
Pro
>WENV170496024
CEVS01017390
56162
Bacteroidota
TGA
Ser
>WENV170496138
CEVS01027758
56162
Bacteroidota
TGA
Ser
>WENV170496360
CEVS01051637
56162
Bacteroidota
TGA
Ser
>WENV170496782
CEVS01097100
56162
Bacteroidota
TGA
Ser
>WENV170497287
CEVS01169537
56162
Bacteroidota
TGA
Ser
>WENV170496688
CEVS01087238
299085
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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