This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170503095
CEVV01052224
400818
Bacteroidota
TTC
Glu
>WENV170504222
CEVV01173540
400818
Bacteroidota
TTC
Glu
>WENV170502765
CEVV01022403
281538
Bacteroidota
GAA
Phe
>WENV170502878
CEVV01031682
156605
Bacteroidota
GAC
Val
>WENV170503356
CEVV01081329
156605
Bacteroidota
GAC
Val
>WENV170503476
CEVV01095128
156605
Bacteroidota
GAC
Val
>WENV170503186
CEVV01062477
23370
Bacteroidota
GGA
Ser
>WENV170502549
CEVV01003886
364431
Bacteroidota
TCC
Gly
>WENV170503606
CEVV01110822
240785
Bacteroidota
GTC
Asp
>WENV170504225
CEVV01173818
240785
Bacteroidota
GTC
Asp
>WENV170504244
CEVV01174450
240785
Bacteroidota
GTC
Asp
>WENV170502872
CEVV01031328
209351
Bacteroidota
CAT
Met
>WENV170504733
CEVV01376577
155786
Bacteroidota
TGG
Pro
>WENV170502884
CEVV01032283
155808
Bacteroidota
TGG
Pro
>WENV170503303
CEVV01075346
155808
Bacteroidota
TGG
Pro
>WENV170503480
CEVV01095696
155808
Bacteroidota
TGG
Pro
>WENV170502707
CEVV01017786
291910
Bacteroidota
TTG
Gln
>WENV170504055
CEVV01163211
366169
Bacteroidota
GAA
Phe
>WENV170502565
CEVV01005900
227539
Bacteroidota
GTT
Asn
>WENV170502725
CEVV01019094
227539
Bacteroidota
GTT
Asn
>WENV170502685
CEVV01015086
156596
Bacteroidota
TAC
Val
>WENV170502877
CEVV01031584
156596
Bacteroidota
TAC
Val
>WENV170503392
CEVV01085745
156596
Bacteroidota
TAC
Val
>WENV170504098
CEVV01166284
156596
Bacteroidota
TAC
Val
>WENV170502738
CEVV01020253
299065
Bacteroidota
TTG
Gln
>WENV170502915
CEVV01035056
299065
Bacteroidota
TTG
Gln
>WENV170502560
CEVV01004838
193718
Bacteroidota
GTC
Asp
>WENV170502574
CEVV01007828
193718
Bacteroidota
GTC
Asp
>WENV170502670
CEVV01014305
193718
Bacteroidota
GTC
Asp
>WENV170503562
CEVV01105195
193718
Bacteroidota
GTC
Asp
>WENV170503832
CEVV01135564
193718
Bacteroidota
GTC
Asp
>WENV170503968
CEVV01153365
181598
Bacteroidota
GTT
Asn
>WENV170503343
CEVV01079423
372845
Bacteroidota
CCA
Trp
>WENV170503904
CEVV01144342
372845
Bacteroidota
CCA
Trp
>WENV170503178
CEVV01061026
182234
Bacteroidota
TGT
Thr
>WENV170503153
CEVV01058090
183480
Bacteroidota
TGC
Ala
>WENV170502851
CEVV01029442
361792
Bacteroidota
GAA
Phe
>WENV170503230
CEVV01068096
361792
Bacteroidota
GAA
Phe
>WENV170503363
CEVV01081922
361792
Bacteroidota
GAA
Phe
>WENV170502537
CEVV01003444
179598
Bacteroidota
CAT
Met
>WENV170502666
CEVV01013840
56162
Bacteroidota
TGA
Ser
>WENV170502743
CEVV01020411
56162
Bacteroidota
TGA
Ser
>WENV170503021
CEVV01043435
56162
Bacteroidota
TGA
Ser
>WENV170503488
CEVV01096992
56162
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK